Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001532.1 Kokia drynarioides strain JFW-HI SEQ_113101, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  132675

Tables:   1   

This is table  1  of  1  ( 59 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
403--445
12
3.6
12
77
0
50
62
0
0
37
0.95
403--443
18
2.3
18
82
0
55
65
0
0
34
0.93
5282--5307
9
2.9
9
100
0
52
42
11
11
34
1.77
5352--5396
23
2.0
23
86
0
63
35
20
13
31
1.91
8603--8656
21
2.6
21
85
2
65
29
11
16
42
1.83
9837--9871
16
2.2
16
89
0
52
80
2
5
11
1.00
10742--10766
5
5.0
5
100
0
50
80
0
0
20
0.72
13037--13062
5
5.2
5
100
0
52
80
0
0
19
0.71
17447--17502
16
3.4
17
76
11
53
25
8
0
66
1.21
17884--17929
23
2.0
23
100
0
92
30
8
4
56
1.49
17968--18040
18
3.8
19
81
10
78
61
0
6
31
1.22
18227--18307
29
2.8
27
78
12
90
30
7
0
61
1.23
27929--28092
59
2.8
58
83
8
183
41
9
21
27
1.84
28047--28419
59
6.5
57
83
7
305
33
3
27
35
1.73
28047--28406
29
12.5
28
73
13
229
33
3
26
36
1.72
28012--28419
58
7.0
57
81
9
300
34
3
26
35
1.74
28160--28367
88
2.4
87
78
9
215
36
2
25
35
1.71
29429--29496
3
22.3
3
96
3
127
32
0
1
66
1.01
30174--30269
6
16.7
6
71
12
76
50
2
1
46
1.20
30174--30269
17
5.6
17
78
1
102
50
2
1
46
1.20
30181--30269
40
2.2
40
80
7
101
49
2
1
47
1.21
39391--39418
3
9.3
3
100
0
56
35
0
0
64
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42193--42262
23
3.0
23
85
2
95
24
12
21
41
1.88
42246--42291
23
2.0
23
83
8
58
39
10
17
32
1.84
44190--44224
17
2.1
16
89
5
52
57
0
0
42
0.99
44450--44506
30
2.0
28
82
6
69
50
12
7
29
1.66
48089--48116
2
14.0
2
100
0
56
50
0
0
50
1.00
48650--48712
30
2.1
30
88
2
92
49
1
4
44
1.33
48691--48765
28
2.7
28
87
4
98
54
10
9
25
1.64
52159--52183
6
4.2
6
100
0
50
16
0
32
52
1.44
60421--60484
30
2.1
30
82
5
76
62
14
14
9
1.54
75832--75921
35
2.6
35
78
3
110
26
20
24
28
1.99
75833--75942
35
3.1
34
75
2
94
29
20
23
27
1.99
76446--76564
56
2.1
56
81
3
132
27
20
21
31
1.98
76488--76590
28
3.7
28
75
1
82
26
18
19
35
1.95
76380--76545
84
2.0
84
81
2
199
26
19
24
30
1.98
76474--76580
56
1.9
56
86
3
153
27
18
19
34
1.95
77873--77968
49
2.0
49
81
4
113
31
30
16
21
1.96
78477--78603
64
2.0
64
96
0
236
33
25
16
25
1.96
79349--79428
24
3.3
24
73
13
74
68
17
5
8
1.34
79346--79455
48
2.3
48
78
6
125
70
15
4
10
1.31
79407--79465
25
2.3
25
82
2
73
69
18
3
8
1.28
79450--79531
22
3.9
21
75
18
71
69
19
2
8
1.26
81574--81607
7
4.9
7
100
0
68
41
0
14
44
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83366--83398
14
2.4
14
94
0
57
69
12
0
18
1.18
83751--83788
18
2.1
18
90
0
58
26
2
2
68
1.16
94347--94378
14
2.3
15
89
10
50
81
0
9
9
0.88
94735--94798
33
1.9
33
100
0
128
37
6
15
40
1.73
96529--96579
20
2.6
19
84
9
66
19
5
13
60
1.53
96848--96899
22
2.4
23
84
12
67
7
15
19
57
1.62
100790--100816
4
6.8
4
100
0
54
0
22
0
77
0.76
101540--101572
15
2.1
16
88
5
50
18
12
0
69
1.18
101786--101812
6
4.5
6
100
0
54
18
14
0
66
1.25
103455--103497
8
5.4
8
86
8
52
0
23
0
76
0.78
103456--103499
14
3.1
14
86
3
52
0
25
0
75
0.81
103465--103500
14
2.6
14
86
0
54
0
30
0
69
0.89
111181--111229
24
2.0
24
100
0
98
28
14
8
48
1.72
115610--115636
2
13.5
2
100
0
54
0
51
0
48
1.00
131025--131065
19
2.2
19
100
0
82
24
24
26
24
2.00

Tables:   1

The End!