Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015329.1 Kokia drynarioides strain JFW-HI SEQ_130376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69773

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
395--422
13
2.2
13
100
0
56
14
25
0
60
1.34
3750--3922
61
2.8
61
86
1
240
36
13
21
27
1.92
3963--4059
28
3.5
28
75
9
90
28
17
23
29
1.97
11583--11641
27
2.2
27
84
6
75
35
18
22
23
1.96
12043--12089
23
2.0
23
83
0
58
38
8
25
27
1.85
13243--13282
20
2.0
20
90
5
62
70
0
0
30
0.88
15145--15211
32
2.1
31
83
10
82
46
0
32
20
1.51
15363--15425
29
2.1
30
85
2
83
52
12
4
30
1.60
17539--17609
33
2.2
33
82
5
81
46
2
7
43
1.45
17748--17773
7
3.7
7
100
0
52
30
0
42
26
1.56
21155--21235
31
2.6
32
84
9
105
51
11
9
27
1.68
21304--21382
35
2.3
35
76
8
83
48
1
10
40
1.45
29529--29584
16
3.5
15
80
20
53
73
1
1
23
1.03
31287--31326
21
1.9
21
85
10
55
45
20
0
35
1.51
31319--31352
12
2.8
12
90
0
50
32
17
0
50
1.47
33930--34296
30
12.3
30
79
7
320
36
1
25
36
1.65
33924--34304
59
6.4
59
78
8
339
36
1
25
37
1.64
33952--34284
89
3.7
89
79
8
290
35
1
25
36
1.66
35295--35341
13
3.9
12
79
17
53
63
0
2
34
1.06
36738--37168
49
8.7
49
74
4
337
17
30
18
33
1.94
36769--37130
99
3.7
98
79
3
395
17
31
17
33
1.93
36787--37170
148
2.6
148
75
4
328
17
30
18
33
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36762--37168
198
2.1
197
84
2
521
17
31
17
33
1.93
41673--41734
30
2.1
30
96
0
115
41
0
25
32
1.56
46103--46478
30
12.5
29
76
12
251
37
1
25
35
1.67
46139--46480
59
5.7
60
77
12
258
36
1
25
35
1.67
46136--46466
61
5.5
60
79
8
291
36
1
25
36
1.67
47421--47445
13
1.9
13
100
0
50
36
0
0
64
0.94
50204--50233
15
2.1
15
93
6
53
76
0
6
16
0.99
50801--50838
18
2.1
18
90
9
60
50
15
10
23
1.75
62925--62975
6
8.5
6
86
0
66
19
33
0
47
1.50
66229--66267
19
2.0
20
90
9
64
66
0
33
0
0.92

Tables:   1

The End!