Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015331.1 Kokia drynarioides strain JFW-HI SEQ_130378, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  253177

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20204--20240
8
4.3
9
83
13
51
67
0
0
32
0.91
23577--23608
16
2.0
17
88
11
50
50
6
18
25
1.70
34860--34884
3
8.3
3
100
0
50
68
32
0
0
0.90
36645--36673
10
2.7
11
94
5
51
20
17
44
17
1.86
41250--41274
2
12.5
2
100
0
50
48
0
52
0
1.00
63399--63445
18
2.6
18
89
0
76
70
6
21
2
1.20
64190--64227
9
4.1
9
93
6
67
86
0
0
13
0.56
64191--64226
10
3.7
10
96
3
65
91
0
0
8
0.41
64191--64227
19
1.9
19
100
0
74
89
0
0
10
0.49
67427--67464
17
2.2
18
85
4
51
26
0
2
71
1.00
81216--81270
23
2.4
23
96
0
101
50
30
12
5
1.63
88159--88191
4
8.2
4
100
0
66
75
0
24
0
0.80
88150--88217
8
8.7
7
80
15
55
66
0
29
4
1.11
94305--94430
23
5.5
23
73
13
98
11
22
21
45
1.83
110680--110711
14
2.1
16
88
11
50
56
9
9
25
1.61
111434--111495
28
2.2
28
88
0
88
27
8
29
35
1.85
111551--111884
29
11.4
30
84
6
418
31
3
29
34
1.76
111551--111884
145
2.3
148
85
6
466
31
3
29
34
1.76
112973--113003
3
10.0
3
93
6
53
32
3
0
64
1.09
113778--113828
11
4.5
11
80
9
50
58
0
0
41
0.98
113777--113824
17
2.8
17
80
3
60
54
0
0
45
0.99
118612--118672
29
2.1
30
84
3
79
50
0
4
44
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120516--120549
5
7.0
5
96
3
61
17
20
41
20
1.91
121608--121660
25
2.2
25
86
3
72
60
5
0
33
1.20
121969--122003
18
2.0
17
94
5
61
57
0
0
42
0.99
122628--122662
18
2.0
17
94
5
61
42
0
0
57
0.99
122915--123010
24
4.2
23
75
12
90
70
15
5
8
1.29
122915--123014
22
4.5
20
70
19
65
70
16
6
8
1.32
126240--126309
30
2.3
31
78
12
72
64
2
2
30
1.22
136690--136747
29
2.1
30
81
12
70
46
0
1
51
1.11
136717--136767
21
2.4
22
90
3
77
43
0
0
56
0.99
136776--136821
18
2.6
18
82
0
56
34
0
2
63
1.07
137027--137263
20
11.8
20
69
9
83
36
14
8
40
1.77
137015--137201
40
4.7
38
72
8
122
39
13
7
40
1.73
137287--137407
40
3.0
40
75
3
102
36
13
4
45
1.65
137342--137393
20
2.6
21
76
17
65
38
7
5
48
1.56
137333--137420
40
2.2
41
81
6
108
37
11
5
45
1.64
137537--137592
20
2.8
20
71
10
60
37
10
5
46
1.62
137692--137850
40
4.0
39
82
8
178
41
11
2
44
1.54
137701--137861
20
8.1
19
65
16
69
44
11
2
42
1.53
137683--137850
80
2.1
80
85
4
223
41
11
2
45
1.53
144264--144308
21
2.1
21
84
8
56
17
2
6
73
1.15
145127--145235
55
2.0
54
87
1
155
54
5
3
36
1.42
149363--149439
3
25.7
3
94
0
118
27
0
5
67
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159875--159899
1
25.0
1
100
0
50
0
0
0
100
0.00
163500--163551
19
2.7
20
72
16
56
65
0
3
30
1.10
165896--165933
20
1.9
20
100
0
76
42
10
0
47
1.38
181826--181878
28
1.9
27
84
3
70
64
0
1
33
1.05
188410--188457
23
2.0
24
88
4
71
68
10
16
4
1.33
199697--199746
18
2.8
18
93
3
84
28
2
0
70
0.99
206009--206056
19
2.4
20
80
16
55
62
4
0
33
1.14
226041--226084
22
2.1
20
83
8
52
34
4
2
59
1.30
239698--239800
23
4.4
23
84
7
136
9
24
21
44
1.82
241582--241612
16
1.9
16
93
0
53
35
6
9
48
1.62
242163--242273
37
3.0
37
85
0
141
10
20
33
35
1.88
244330--244404
23
3.3
22
81
3
87
37
29
20
13
1.90
246681--246740
13
4.6
13
73
8
59
48
1
6
43
1.39

Tables:   1

The End!