Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015342.1 Kokia drynarioides strain JFW-HI SEQ_130389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  128256

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9168--9231
30
2.2
30
83
5
87
26
4
18
50
1.67
9245--9285
14
2.9
15
78
14
50
53
0
7
39
1.29
11275--11307
6
5.5
6
92
0
57
54
12
0
33
1.37
12048--12092
23
2.0
23
86
0
63
20
0
24
55
1.43
12148--12187
17
2.3
18
86
4
55
30
2
0
67
1.04
18267--18298
15
2.0
17
88
11
50
68
0
0
31
0.90
18255--18308
22
2.4
22
81
15
65
62
0
0
37
0.95
19634--19701
30
2.3
30
84
5
84
29
26
8
35
1.87
21380--21642
132
2.0
132
94
0
463
35
12
10
41
1.76
28682--28716
2
17.5
2
93
0
61
45
0
0
54
0.99
28657--28712
8
7.2
8
80
6
53
42
1
0
55
1.10
46257--46412
78
2.0
78
100
0
312
38
17
14
29
1.89
50721--50753
11
3.0
11
86
13
50
54
27
18
0
1.44
53618--53648
6
5.3
6
92
7
55
67
0
32
0
0.91
55543--55570
8
3.5
8
100
0
56
89
0
0
10
0.49
55832--55885
26
2.1
26
100
0
108
42
12
14
29
1.83
58122--58282
87
1.9
84
84
6
216
29
13
20
36
1.91
63536--63587
15
3.2
15
73
19
50
44
0
1
53
1.11
63620--63656
16
2.3
16
86
13
58
40
0
0
59
0.97
66905--66935
14
2.2
14
100
0
62
48
0
0
51
1.00
78737--78769
12
2.8
12
90
9
50
18
0
3
78
0.87
80534--80576
20
2.2
20
91
0
68
76
0
0
23
0.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80519--80575
12
4.9
12
77
16
50
73
0
0
26
0.83
80688--80724
19
1.9
19
88
0
56
37
8
8
45
1.63
81022--81061
21
2.0
20
90
9
64
65
10
5
20
1.42
81168--81211
17
2.6
17
85
7
54
52
0
4
43
1.22
90351--90409
29
2.1
28
83
3
73
35
5
6
52
1.50
93252--93294
18
2.4
18
88
7
61
44
0
2
53
1.13
93729--93769
20
2.0
20
85
0
55
24
7
14
53
1.66
97058--97111
27
2.2
25
76
20
60
55
1
5
37
1.34
102742--102773
13
2.5
13
94
0
55
34
9
0
56
1.32
103099--103145
6
8.2
6
76
9
53
51
2
2
44
1.25
103099--103145
17
2.8
17
90
0
67
51
2
2
44
1.25
103310--103447
29
4.7
31
73
14
116
31
31
5
31
1.79
103310--103447
59
2.4
58
86
3
188
31
31
5
31
1.79
108912--108951
21
1.9
21
84
0
53
17
7
17
57
1.62
109942--109972
16
1.9
16
93
0
53
16
6
0
77
0.97
109932--109991
22
2.8
22
85
7
79
16
10
0
73
1.09
112314--112349
18
2.1
18
89
5
56
41
27
19
11
1.85
124004--124083
23
3.5
22
81
3
88
38
28
18
13
1.89
126999--127048
23
2.2
22
89
3
73
40
26
18
16
1.90
127075--127120
23
2.0
23
100
0
92
43
21
26
8
1.81
127724--127753
10
2.8
11
90
10
53
30
6
0
63
1.20

Tables:   1

The End!