Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015345.1 Kokia drynarioides strain JFW-HI SEQ_130392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58301

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1019--1068
22
2.3
22
79
3
57
66
4
4
26
1.27
2439--2483
19
2.3
21
75
21
53
46
2
2
48
1.26
2557--2602
24
2.0
23
91
4
74
60
2
0
36
1.09
2573--2607
17
2.1
16
89
5
52
60
2
0
37
1.12
2520--2606
40
2.2
40
83
6
104
54
2
0
43
1.13
10683--10714
16
2.0
17
88
11
50
53
6
12
28
1.62
10840--10873
8
4.1
8
96
3
59
47
0
0
52
1.00
19881--19970
38
2.2
40
88
7
130
54
5
0
40
1.24
20079--20138
31
2.0
30
84
9
79
48
3
0
48
1.18
22339--22506
83
2.0
83
96
0
309
28
22
13
35
1.92
35946--35997
10
5.4
10
73
17
56
32
0
0
67
0.91
35947--36015
21
3.5
21
74
20
67
34
0
0
65
0.93
35949--36025
39
2.0
38
92
2
127
36
0
0
63
0.95
36153--36284
43
3.2
40
77
11
106
61
5
14
18
1.51
36254--36341
20
4.6
19
76
7
61
63
3
7
25
1.37
36254--36353
38
2.5
39
79
11
123
61
3
10
26
1.42
38142--38192
18
2.9
18
80
8
61
29
11
0
58
1.33
38142--38209
16
4.1
17
78
14
63
32
8
0
58
1.29
38545--38573
11
2.6
11
100
0
58
31
13
13
41
1.84
42088--42161
24
3.2
22
83
11
85
71
9
6
12
1.30
42509--42582
33
2.2
34
86
9
100
28
16
0
55
1.41
42607--42678
26
2.5
30
73
21
80
34
9
2
52
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42624--42670
14
3.5
13
77
11
51
38
8
2
51
1.45
42616--42671
26
2.2
26
96
0
103
35
10
1
51
1.47
54250--54306
29
1.9
30
89
3
89
54
12
1
31
1.48
54690--54715
2
13.0
2
100
0
52
50
0
0
50
1.00
55038--55073
19
1.9
19
88
5
56
58
5
5
30
1.44
55539--55619
6
14.2
6
68
10
53
43
2
2
51
1.28
55539--55616
17
4.6
17
82
7
79
42
2
2
52
1.28
55539--55616
34
2.3
34
84
4
95
42
2
2
52
1.28
57572--57919
29
11.9
29
72
17
231
31
28
6
34
1.81
57572--57963
58
6.7
59
75
9
263
31
28
6
33
1.82
57716--57953
117
2.0
117
80
7
270
33
29
6
30
1.83

Tables:   1

The End!