Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001535.1 Kokia drynarioides strain JFW-HI SEQ_113105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20163

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247--318
17
4.4
17
79
13
87
54
4
1
40
1.28
247--318
32
2.2
33
90
9
112
54
4
1
40
1.28
983--1853
49
17.8
48
70
8
529
15
25
20
38
1.92
982--1853
98
8.9
98
82
4
828
15
25
20
38
1.92
973--1661
197
3.5
196
85
4
870
16
25
20
38
1.92
973--1853
147
6.0
147
73
7
613
15
25
20
38
1.92
973--1662
295
2.3
295
88
0
1031
16
25
20
38
1.93
6507--6548
18
2.3
19
87
4
59
4
28
2
64
1.26
12989--13181
96
2.0
96
86
7
266
38
12
17
30
1.88
13400--13459
28
2.1
28
87
0
84
28
8
31
31
1.86
13555--13727
29
6.0
28
73
12
138
39
1
26
32
1.67
13497--13741
58
4.2
56
78
13
230
38
2
26
32
1.70
13418--13741
28
11.1
28
68
19
141
38
4
25
31
1.75
13630--13751
57
2.1
58
84
4
158
39
3
24
32
1.72
14711--14784
3
24.0
3
86
5
103
35
0
1
63
1.03
15609--15680
17
4.4
17
76
13
78
52
4
2
40
1.35
15609--15680
32
2.2
33
85
9
103
52
4
2
40
1.35
16558--16607
24
2.1
24
84
0
64
54
2
2
42
1.23
17201--17233
16
2.1
16
94
0
57
54
0
0
45
0.99
17206--17238
16
2.1
16
94
0
57
51
0
0
48
1.00
18703--18744
22
2.0
22
85
4
59
16
19
28
35
1.93
18823--18966
78
1.9
77
82
1
180
30
27
13
28
1.94

Tables:   1

The End!