Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015375.1 Kokia drynarioides strain JFW-HI SEQ_130422, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122193

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
505--892
206
1.9
206
92
0
659
36
20
22
21
1.95
1327--1406
17
4.7
17
85
0
106
42
1
3
52
1.27
1327--1409
6
14.5
6
70
18
52
43
1
3
51
1.26
1969--2073
3
34.7
3
82
9
115
60
0
3
35
1.22
3037--3316
29
9.7
29
78
11
263
31
29
5
33
1.80
3042--3313
58
4.7
58
82
5
302
32
29
5
33
1.79
3042--3313
86
3.1
85
80
7
307
32
29
5
33
1.79
3158--3383
59
3.9
59
77
12
166
32
28
5
33
1.80
6236--6357
61
2.0
61
100
0
244
40
16
18
24
1.90
23219--23432
106
2.0
106
98
0
410
25
16
23
35
1.95
25590--25634
19
2.2
20
84
11
56
20
6
2
71
1.20
31448--31509
31
2.1
30
81
6
72
45
0
1
53
1.10
33441--33538
52
1.9
52
82
2
126
52
3
9
35
1.49
33842--33926
41
2.1
41
100
0
170
24
34
9
31
1.87
38686--38771
24
3.6
24
85
6
122
27
25
20
25
1.99
49245--49290
15
3.0
15
83
3
56
71
2
0
26
0.97
50849--50916
26
2.6
25
81
6
73
45
4
2
47
1.38
50935--50994
26
2.4
25
81
10
77
53
0
6
40
1.27
54703--54855
51
3.0
51
94
0
270
18
15
26
38
1.91
55644--55707
30
2.1
31
75
11
62
57
1
1
39
1.17
71606--71677
16
4.5
16
74
6
65
45
6
19
27
1.76
71690--71797
44
2.5
44
92
0
180
31
3
25
39
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75952--75994
20
2.0
22
86
8
63
30
0
6
62
1.21
77211--77243
5
6.6
5
100
0
66
36
0
0
63
0.95
79046--79097
5
10.4
5
95
0
68
67
1
0
30
1.02
79422--79454
14
2.4
14
90
5
50
0
36
0
63
0.95
79432--79477
11
4.0
11
83
8
56
0
34
2
63
1.07
79986--80033
15
3.2
15
77
11
53
50
2
18
29
1.59
80170--80205
18
2.0
18
89
10
56
61
13
0
25
1.33
80569--80603
15
2.2
16
90
10
54
60
0
0
40
0.97
80636--80691
15
3.5
15
75
13
58
50
1
1
46
1.22
102106--102130
5
5.0
5
100
0
50
20
0
0
80
0.72
102522--102563
20
2.0
21
90
4
68
23
40
0
35
1.55
106424--106475
15
3.4
15
73
5
50
42
0
5
51
1.25
106541--106581
19
2.2
18
86
4
55
51
0
2
46
1.14
107016--107085
30
2.7
24
75
23
70
44
1
4
50
1.30
107031--107086
30
1.9
30
92
7
98
42
0
5
51
1.24
107568--107617
26
1.9
26
84
8
66
50
2
2
46
1.24
110560--110637
39
2.0
39
100
0
156
58
12
7
20
1.58
113937--113982
14
3.4
14
70
11
51
8
23
6
60
1.49
113931--113983
26
2.0
26
100
0
106
11
22
7
58
1.57
120802--120839
3
12.7
3
100
0
76
65
0
0
34
0.93

Tables:   1

The End!