Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015378.1 Kokia drynarioides strain JFW-HI SEQ_130425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109524

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7507--7534
13
2.2
13
100
0
56
35
0
0
64
0.94
15393--15655
43
6.2
42
86
4
375
19
19
30
30
1.96
15393--15655
85
3.1
85
88
3
386
19
19
30
30
1.96
15344--15655
128
2.4
128
85
4
389
21
18
29
30
1.97
43967--43994
4
7.0
4
100
0
56
75
0
25
0
0.81
44475--44537
29
2.2
29
82
5
74
44
12
3
39
1.59
44489--44539
14
3.6
14
77
15
50
39
13
3
43
1.63
44961--45000
2
20.0
2
100
0
80
50
0
0
50
1.00
50232--50319
46
1.9
46
97
0
167
38
13
6
40
1.71
51319--51358
20
2.0
21
90
5
64
37
0
0
62
0.95
51319--51358
21
1.9
19
85
14
53
37
0
0
62
0.95
51319--51365
20
2.2
20
85
7
58
40
0
2
57
1.11
52610--52676
29
2.3
30
80
12
86
38
1
0
59
1.06
57444--57498
27
2.0
27
92
0
92
18
25
10
45
1.82
58216--58245
5
6.0
5
100
0
60
80
20
0
0
0.72
59199--59240
20
2.2
19
83
12
50
19
2
7
71
1.20
77827--77878
22
2.4
22
76
0
59
50
3
9
36
1.54
89939--89978
20
2.0
21
85
5
55
50
15
7
27
1.70
102191--102243
21
2.5
21
73
11
54
35
16
7
39
1.78

Tables:   1

The End!