Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001558.1 Kokia drynarioides strain JFW-HI SEQ_113152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  132351

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5222--5251
15
2.1
14
93
6
51
10
0
0
90
0.47
8168--8209
14
3.0
14
83
10
59
69
4
7
19
1.31
8387--8463
28
2.7
29
86
8
95
33
9
27
29
1.88
8449--8705
29
8.6
29
73
11
169
37
1
23
37
1.63
8457--8637
30
6.0
29
71
15
109
37
1
23
38
1.62
8551--8727
30
5.9
30
74
5
126
36
1
25
35
1.67
8492--8776
60
4.8
58
80
6
200
36
2
25
35
1.71
8686--8761
28
2.7
27
72
12
64
35
7
26
30
1.85
8686--8773
29
3.0
30
72
21
96
35
7
26
30
1.85
10545--10634
6
14.8
6
72
16
53
55
4
1
38
1.27
10553--10622
17
4.1
17
80
7
70
57
4
1
37
1.27
10609--10637
7
4.1
7
100
0
58
55
0
0
44
0.99
53685--53876
56
3.4
56
87
0
269
33
22
18
25
1.97
72505--72537
16
2.0
17
94
5
59
21
6
30
42
1.77
79987--80030
22
2.0
21
83
12
54
13
22
4
59
1.53
80881--80929
21
2.3
21
86
6
64
16
0
42
40
1.48
83387--83498
37
3.0
36
85
3
134
11
18
32
37
1.87
84121--84314
93
2.1
93
99
0
379
35
13
18
32
1.90
87003--87040
19
2.0
19
85
10
51
63
5
18
13
1.48
92369--92403
15
2.3
15
95
0
61
17
20
28
34
1.95
99783--99830
17
2.8
18
75
12
57
60
6
0
33
1.22
100252--100333
22
3.9
21
77
17
80
8
3
18
69
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100317--100417
35
2.8
36
79
7
116
9
8
14
66
1.44
100340--100390
23
2.2
23
86
6
68
9
7
15
66
1.43
100354--100426
23
3.2
22
75
11
58
12
6
10
69
1.35
101705--101748
19
2.3
20
81
18
58
43
11
0
45
1.40
101716--101756
18
2.2
19
86
4
57
48
9
0
41
1.36
101911--101944
10
3.3
10
92
8
59
17
0
0
82
0.67
101911--101944
11
3.2
11
95
4
61
17
0
0
82
0.67
106330--106379
26
1.9
26
84
8
66
50
8
6
36
1.57
107034--107085
18
3.1
17
77
5
52
34
0
1
63
1.06
109871--109901
10
3.1
10
100
0
62
90
0
0
9
0.46
112075--112185
23
4.8
23
83
3
125
41
20
10
27
1.85
112201--112235
4
8.5
4
93
6
61
77
22
0
0
0.78
112201--112243
21
2.0
21
91
8
70
76
20
0
2
0.89
112293--112347
12
4.7
12
79
2
58
49
18
14
18
1.80
113474--113519
15
2.7
18
77
19
53
69
8
4
17
1.31
113580--113647
29
2.4
29
80
2
75
32
7
23
36
1.83
113657--114010
58
6.0
58
76
12
260
38
1
24
35
1.66
113637--113999
29
12.3
30
70
15
183
37
1
24
36
1.66
113780--114010
29
7.9
28
75
15
184
38
1
25
34
1.66
115087--115177
19
4.6
19
66
20
60
40
0
2
57
1.11
115087--115129
12
3.5
13
81
9
54
39
0
0
60
0.97
115861--115895
17
2.1
17
94
0
61
57
2
0
40
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
116548--116710
49
3.3
48
77
6
157
14
24
22
38
1.92
116504--116921
98
4.4
98
78
10
447
17
23
19
39
1.92
116623--116782
85
1.9
85
89
2
250
16
21
23
38
1.92
116744--116902
49
3.2
49
73
10
162
18
25
15
40
1.90
116538--116880
183
1.9
183
89
1
535
17
23
20
38
1.93
117332--117367
18
2.0
18
94
0
63
58
11
11
19
1.62

Tables:   1

The End!