Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001569.1 Kokia drynarioides strain JFW-HI SEQ_113169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19180

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1949--1994
24
1.9
24
90
0
74
47
13
4
34
1.62
3167--3231
30
2.2
30
91
0
103
21
4
15
58
1.55
3183--3246
30
2.2
30
82
2
76
25
6
15
53
1.65
3782--3860
40
2.0
40
85
5
106
40
17
17
24
1.91
3890--3931
21
2.0
21
100
0
84
23
14
33
28
1.94
3850--3972
62
2.0
61
88
1
183
35
16
26
21
1.94
3911--4003
41
2.3
41
94
0
159
36
15
25
22
1.93
4449--4481
13
2.5
13
85
14
50
69
0
6
24
1.10
5150--5317
83
2.0
84
86
3
232
38
16
20
25
1.93
6846--7033
56
3.4
55
75
5
198
33
14
17
34
1.90
8785--8829
20
2.2
20
80
0
54
24
4
4
66
1.29
8821--8877
24
2.4
23
81
18
64
33
5
3
57
1.38
8873--8915
20
2.2
20
91
0
68
16
6
6
69
1.32
8908--8977
36
2.0
36
86
8
99
34
5
5
54
1.48
10074--10236
6
27.7
6
69
21
80
29
6
1
63
1.26
10081--10236
29
5.3
29
94
0
249
29
6
0
63
1.24
10128--10218
11
7.9
11
72
13
58
28
6
0
64
1.18
10831--10919
31
2.9
31
91
0
151
42
21
10
25
1.84
11075--11464
59
6.6
58
80
8
407
39
15
16
28
1.89
11075--11464
58
6.6
60
79
10
412
39
15
16
28
1.89
11075--11456
117
3.3
113
82
9
412
39
15
16
28
1.90
13348--13398
20
2.5
20
90
0
84
50
7
15
25
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13461--13506
22
2.1
22
91
0
74
41
6
10
41
1.66
13756--13791
8
4.5
8
92
0
63
38
0
0
61
0.96
13756--13796
16
2.6
16
92
0
64
43
0
0
56
0.99
13764--13972
42
5.1
42
69
23
160
48
7
0
43
1.35
13896--13972
25
3.2
25
66
17
72
51
9
0
38
1.34
13856--13972
47
2.6
45
86
6
159
49
9
0
40
1.41
13764--13973
115
1.8
116
84
7
293
48
7
0
43
1.35
16324--16421
27
3.6
27
90
1
133
20
16
26
36
1.93
16324--16421
28
3.6
28
88
4
146
20
16
26
36
1.93
18423--18456
14
2.3
15
85
5
52
50
20
8
20
1.75

Tables:   1

The End!