Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000157.1 Kokia drynarioides strain JFW-HI SEQ_110819, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70618

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2646--2946
43
7.0
43
75
2
219
28
11
25
34
1.91
2646--2961
129
2.5
128
77
1
326
28
11
25
35
1.91
16087--16123
11
3.5
11
89
10
51
0
16
0
83
0.64
29421--29500
37
2.2
37
88
0
115
27
30
21
21
1.98
29531--29610
37
2.1
37
84
6
99
33
22
11
32
1.89
29513--29610
38
2.6
38
76
7
101
31
23
13
31
1.93
32564--32676
44
2.6
44
97
0
217
20
16
15
46
1.83
35792--35824
17
1.9
17
93
0
57
9
33
27
30
1.88
36297--36321
11
2.3
11
100
0
50
44
0
0
56
0.99
36332--36360
9
3.2
9
100
0
58
48
0
0
51
1.00
38097--38156
32
2.0
31
87
9
88
43
8
10
38
1.68
42909--42942
16
2.1
16
100
0
68
52
20
11
14
1.73
53303--53336
18
1.9
17
88
5
50
23
11
8
55
1.63
64024--64081
26
2.2
26
90
0
89
34
20
18
25
1.96
67785--67828
5
8.6
5
88
11
63
81
0
18
0
0.68
67785--67828
16
2.9
15
90
10
63
81
0
18
0
0.68
68261--68338
37
2.1
37
85
4
104
26
26
19
26
1.99
68377--68457
37
2.2
38
82
6
94
30
24
13
30
1.94
69166--69340
35
5.1
35
76
12
143
45
15
3
36
1.63
69166--69336
69
2.5
69
77
12
167
45
15
2
36
1.61
70340--70588
126
2.0
127
84
0
329
37
18
18
24
1.94

Tables:   1

The End!