Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001600.1 Kokia drynarioides strain JFW-HI SEQ_113225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35761

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
412--457
23
2.0
23
86
0
65
45
2
0
52
1.13
427--513
11
7.7
11
73
10
52
55
2
1
41
1.20
416--504
17
5.2
17
84
1
115
53
2
1
42
1.20
427--504
6
13.5
6
74
12
74
55
1
1
42
1.16
698--857
58
2.6
61
85
7
218
24
13
12
50
1.76
8044--8425
189
2.0
189
92
3
644
31
20
13
34
1.91
10776--10954
50
3.5
51
84
6
240
30
11
24
34
1.90
11712--11771
21
2.9
21
84
0
84
35
11
21
31
1.90
13888--13921
5
6.8
5
93
0
50
67
0
32
0
0.91
13888--13924
15
2.5
15
90
0
56
70
0
29
0
0.88
14903--14927
9
2.8
9
100
0
50
0
8
0
92
0.40
16311--16348
19
2.0
19
89
0
58
42
39
0
18
1.50
16937--17029
39
2.4
38
79
10
100
56
7
1
34
1.34
16948--17038
39
2.2
41
86
5
123
53
7
2
36
1.42
17099--17141
22
2.0
22
90
0
68
30
0
11
58
1.34
17135--17189
26
2.2
25
83
9
67
47
1
1
49
1.23
23749--23825
17
4.5
17
81
0
73
45
1
2
50
1.23
24453--24511
3
19.3
3
79
10
66
57
1
1
38
1.19
24437--24503
31
2.1
31
83
8
80
55
2
1
40
1.24
25608--25975
87
4.2
86
81
9
322
35
23
3
37
1.71
25607--25983
29
13.0
29
72
17
232
35
23
3
37
1.72
25695--26012
87
3.6
87
80
11
316
32
25
4
37
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34671--34995
146
2.2
147
84
6
404
33
18
23
24
1.97
34943--35338
206
1.9
206
87
2
580
33
18
23
24
1.97
35673--35719
17
2.7
17
86
3
67
44
0
2
53
1.12
35673--35749
17
4.5
17
80
0
64
46
1
2
49
1.23

Tables:   1

The End!