Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001611.1 Kokia drynarioides strain JFW-HI SEQ_113244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88849

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4415--4447
9
3.7
9
95
0
57
21
0
6
72
1.05
8041--8103
7
9.1
7
80
3
74
17
23
25
33
1.96
9065--9116
21
2.5
21
84
6
70
30
26
13
28
1.94
15373--15489
22
5.4
21
74
14
96
10
7
17
64
1.46
15377--15480
43
2.4
42
80
4
118
11
7
15
65
1.46
15451--15490
20
2.0
20
85
9
55
10
5
17
67
1.37
15497--15565
33
2.1
33
84
10
88
2
4
23
69
1.20
15540--15588
20
2.3
23
79
13
59
12
0
18
69
1.19
15695--15744
24
2.1
24
82
14
59
24
0
6
70
1.10
20867--20915
24
2.0
24
88
0
71
42
26
12
18
1.85
34256--34475
81
2.7
81
89
0
341
30
39
15
14
1.88
34238--34496
27
9.6
27
86
0
286
30
37
16
15
1.90
34919--34989
35
2.0
35
100
0
142
19
19
8
52
1.72
41398--41561
82
2.0
82
96
0
301
31
22
18
27
1.97
43711--43755
8
5.1
8
80
19
54
35
0
2
62
1.08
43711--43755
19
2.5
17
80
19
56
35
0
2
62
1.08
46904--46963
31
2.0
30
83
9
77
23
6
16
53
1.66
61056--61089
17
2.0
17
94
0
59
0
44
0
55
0.99
63378--63499
58
2.1
58
98
0
235
34
8
24
32
1.85
64580--64619
21
1.9
21
90
10
64
60
5
5
30
1.40
68245--68299
25
2.2
25
83
3
76
12
16
3
67
1.36
82880--82945
30
2.2
30
81
7
73
34
4
7
53
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82877--82945
29
2.3
30
78
9
79
34
4
8
52
1.52
83077--83162
31
2.9
30
77
5
84
41
15
10
32
1.81
85039--85077
21
1.9
20
84
5
51
25
15
7
51
1.70
88268--88316
18
2.8
18
87
6
66
38
6
0
55
1.25
88777--88819
14
3.0
14
76
6
50
69
11
0
18
1.17

Tables:   1

The End!