Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001621.1 Kokia drynarioides strain JFW-HI SEQ_113255, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122843

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
658--683
13
2.0
13
100
0
52
23
7
23
46
1.78
694--744
6
9.0
6
77
12
54
52
1
0
45
1.12
687--733
23
2.1
22
88
4
67
53
2
0
44
1.12
700--744
16
2.7
17
82
6
65
53
2
0
44
1.13
687--743
10
5.8
10
70
25
50
54
1
0
43
1.10
1596--1628
3
11.0
3
100
0
66
66
0
0
33
0.92
2256--2343
29
3.0
28
79
12
88
40
4
7
46
1.53
2818--2888
29
2.4
30
81
9
83
46
14
5
33
1.67
3362--3410
12
4.2
12
75
15
50
38
2
0
59
1.09
3353--3424
34
2.1
35
89
2
110
40
4
1
54
1.28
16584--16632
22
2.3
21
82
3
53
20
2
12
65
1.35
17405--17451
22
2.1
22
84
7
60
65
4
0
29
1.11
23082--23157
38
2.0
38
94
0
134
34
21
7
36
1.82
33630--33810
59
3.1
59
84
4
231
25
14
11
48
1.77
33971--34104
57
2.3
58
81
2
162
55
9
6
28
1.58
41692--41801
23
4.8
23
84
2
123
28
10
19
42
1.83
45408--45453
24
2.0
23
86
4
65
26
10
4
58
1.50
58565--58595
15
2.1
15
93
0
53
22
16
19
41
1.89
59046--59118
20
3.8
19
82
8
76
64
1
0
34
1.02
59082--59106
11
2.3
11
100
0
50
76
0
0
24
0.80
59046--59118
9
7.6
9
77
18
67
64
1
0
34
1.02
59062--59128
30
2.2
31
81
7
66
65
4
0
29
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63508--63691
27
6.8
27
87
0
224
26
15
21
36
1.94
63506--63691
54
3.4
54
86
0
255
25
15
22
36
1.93
78781--78815
18
1.9
18
88
0
52
34
11
14
40
1.82
78955--79021
20
3.5
19
70
25
61
53
1
0
44
1.09
79010--79052
11
3.9
11
93
0
77
53
0
0
46
1.00
83875--83911
15
2.5
15
100
0
74
24
18
27
29
1.98
84367--84403
17
2.2
17
90
0
56
51
10
13
24
1.73
93171--93837
337
2.0
329
93
3
1131
25
24
15
34
1.95
106151--106898
49
15.3
49
79
5
498
22
26
15
35
1.94
106153--106918
147
5.2
146
81
3
720
22
26
15
35
1.94
106152--106909
98
7.7
97
79
4
596
22
27
15
35
1.94
107743--107826
1
84.0
1
68
0
51
1
14
0
84
0.68
107744--107825
5
16.8
5
77
19
77
1
14
0
84
0.69
107743--107825
36
2.4
32
83
16
105
1
14
0
84
0.69
107743--107826
10
8.5
10
81
7
100
1
14
0
84
0.68
108016--108095
5
15.8
5
78
17
69
0
17
0
82
0.67
108016--108097
22
3.4
25
77
14
93
0
17
0
82
0.66
108017--108090
17
4.8
16
76
17
66
0
17
0
82
0.67
108015--108090
32
2.4
32
87
10
104
0
17
0
82
0.66
107589--108130
272
2.0
271
94
1
951
13
18
13
54
1.71
108015--108097
11
7.2
11
76
20
73
0
16
0
83
0.65
108049--108104
26
2.2
26
80
6
60
0
16
5
78
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110951--111006
23
2.4
23
100
0
112
33
17
3
44
1.66
117703--117735
17
2.0
17
88
5
50
30
6
6
57
1.47
117836--117887
20
2.6
19
79
8
59
61
5
3
28
1.37
117995--118048
16
3.4
16
92
0
90
55
1
14
27
1.50
121502--121575
32
2.2
32
83
9
87
29
5
12
52
1.60

Tables:   1

The End!