Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001690.1 Kokia drynarioides strain JFW-HI SEQ_113369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49158

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6890--6937
22
2.2
21
78
10
51
22
20
2
54
1.55
7121--7155
10
3.4
10
92
4
52
40
28
2
28
1.71
9061--9093
17
1.9
17
93
0
57
15
9
3
72
1.21
10319--10374
27
2.1
27
93
0
94
28
28
12
30
1.93
11709--11740
15
2.1
15
94
0
55
15
21
6
56
1.62
15823--16006
30
6.2
31
82
6
168
36
20
1
41
1.62
15912--16189
30
9.5
30
81
10
211
35
25
2
35
1.71
15959--16186
28
7.9
28
82
10
194
34
26
3
35
1.74
15959--16120
57
2.8
57
81
12
181
33
25
4
35
1.76
15929--16141
57
3.7
56
76
12
159
35
26
3
34
1.73
20813--20889
17
5.1
17
69
26
57
38
0
2
58
1.12
20806--20900
25
3.9
25
81
10
99
42
0
2
55
1.11
20808--20896
6
14.8
6
75
14
60
41
0
2
56
1.12
21455--21480
11
2.4
11
100
0
52
73
0
0
26
0.84
27892--27977
9
9.4
9
80
10
79
80
0
17
2
0.82
27873--27985
30
3.7
30
81
12
115
78
0
15
5
0.92
27892--27982
31
2.8
33
74
16
89
79
0
17
3
0.87
27873--27976
39
2.6
39
82
11
115
79
0
15
4
0.89
27906--27984
14
5.6
13
72
24
63
79
0
17
2
0.84
29013--29381
49
7.5
49
78
4
296
33
14
31
20
1.93
28898--29391
50
10.0
49
74
7
268
32
14
30
21
1.94
29013--29381
99
3.8
99
81
5
392
33
14
31
20
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29552--29646
41
2.3
41
83
3
129
33
18
13
33
1.90
29635--29942
39
7.9
39
68
11
132
24
30
18
25
1.98
29636--29934
78
3.8
78
81
2
334
23
30
19
26
1.98
30046--30552
209
2.4
209
85
4
673
37
17
22
22
1.94
31034--31161
6
21.8
6
68
7
57
35
1
5
57
1.32
31032--31153
17
7.1
17
83
5
147
34
1
5
58
1.32
31032--31149
35
3.4
35
91
1
184
34
1
5
57
1.33
31032--31153
52
2.3
52
84
4
165
34
1
5
58
1.32
31722--31747
11
2.4
11
100
0
52
73
0
0
26
0.84
38164--38785
50
12.6
50
74
5
336
33
17
31
16
1.93
38164--38533
149
2.5
149
79
1
375
33
18
31
15
1.93
38421--38588
49
3.4
49
80
3
151
35
20
29
14
1.93
38516--38784
98
2.7
98
76
7
258
34
15
31
17
1.92
39297--39333
16
2.3
16
95
0
65
48
24
5
21
1.71
39807--39841
12
2.8
12
87
12
52
60
0
2
37
1.12
40797--41179
59
6.5
59
80
9
295
37
25
1
36
1.63
40787--41179
30
13.4
29
80
12
290
37
25
1
35
1.63
41155--41227
29
2.5
29
82
10
87
41
21
1
35
1.62

Tables:   1

The End!