Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001692.1 Kokia drynarioides strain JFW-HI SEQ_113371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49364

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67--130
18
3.6
18
83
12
69
0
35
0
64
0.94
69--108
7
6.1
7
80
16
50
0
40
0
60
0.97
100--143
4
11.8
4
86
13
67
0
25
0
75
0.81
69--138
22
3.0
22
85
10
79
0
34
0
65
0.93
105--139
18
1.9
18
100
0
70
0
25
0
74
0.82
101--143
22
2.0
21
95
4
77
0
25
0
74
0.82
5153--5263
32
3.4
32
74
14
100
57
3
11
27
1.50
5117--5231
34
3.5
34
72
15
132
56
4
12
26
1.54
5096--5283
66
2.9
65
87
2
270
56
5
10
27
1.53
23611--24075
159
2.9
159
82
2
576
37
12
25
24
1.90
25917--26119
72
2.8
72
80
5
248
22
29
25
23
1.99
30908--30949
21
2.0
21
90
0
66
33
9
19
38
1.84
32386--32456
25
2.8
25
80
4
81
26
21
32
19
1.97
32475--32509
17
2.1
17
94
0
61
34
17
20
28
1.95
35251--35306
20
2.8
21
78
5
62
32
10
12
44
1.77
35798--35825
2
14.0
2
100
0
56
50
50
0
0
1.00
36117--36216
23
4.3
23
93
2
157
38
26
21
15
1.92
43318--43403
25
3.5
25
72
3
93
17
20
29
32
1.96
43311--43386
24
3.1
23
72
10
71
22
22
26
28
1.99
43311--43407
49
2.0
49
95
0
176
19
20
27
31
1.97
44029--44080
21
2.5
21
81
6
61
25
15
28
30
1.96

Tables:   1

The End!