Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001712.1 Kokia drynarioides strain JFW-HI SEQ_113406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78126

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3609--3645
18
2.1
17
90
5
56
56
0
0
43
0.99
9074--9105
16
2.0
17
88
11
50
78
6
9
6
1.10
26381--26411
3
10.0
3
93
6
53
3
32
0
64
1.09
39054--39205
37
4.1
37
87
3
209
34
27
9
27
1.89
39054--39205
73
2.1
74
90
3
236
34
27
9
27
1.89
41627--41941
158
2.0
157
85
1
425
34
23
17
24
1.96
50764--50909
52
2.8
52
94
0
256
26
14
25
33
1.94
68014--68175
58
2.8
57
88
1
234
39
3
23
33
1.72
68026--68242
29
7.5
29
68
16
121
40
3
23
32
1.72
68072--68256
87
2.1
88
81
9
218
41
3
25
30
1.71
69390--69425
3
12.0
3
88
11
56
33
2
0
63
1.08
70163--70247
6
14.8
6
67
14
54
52
4
2
40
1.35
70170--70247
17
4.6
17
80
6
95
53
5
2
38
1.37
70204--70271
17
4.0
17
84
0
64
58
5
1
33
1.31
70193--70266
28
2.6
28
81
8
71
56
6
1
35
1.34
70737--70773
3
12.3
3
100
0
74
67
0
0
32
0.91
72863--72937
30
2.6
29
82
4
89
40
21
17
21
1.92
72853--72937
30
2.9
30
76
10
88
36
22
15
25
1.93
72988--73111
28
4.4
28
79
4
108
31
16
20
30
1.95
73002--73139
56
2.5
55
85
4
170
29
17
21
31
1.96
73002--73139
28
4.9
28
81
5
145
29
17
21
31
1.96
75174--75221
26
1.9
25
87
8
71
39
0
35
25
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75283--75328
24
2.0
23
86
4
65
34
17
15
32
1.91
76209--76270
23
2.7
23
80
16
76
58
4
1
35
1.29
76218--76270
21
2.5
22
84
12
74
56
5
1
35
1.34
76203--76317
20
5.6
20
72
15
67
66
4
1
27
1.21
76234--76279
21
2.1
22
80
11
51
65
4
0
30
1.12
76256--76317
18
3.2
19
77
11
63
74
4
1
19
1.09
76265--76317
19
2.8
19
83
13
58
75
3
1
18
1.05
76590--76654
28
2.4
28
82
10
89
32
1
0
66
1.01
76589--76654
19
3.7
17
73
13
53
33
1
0
65
1.02
77153--77226
31
2.4
30
82
10
80
41
1
5
51
1.33
77618--77650
16
2.1
16
100
0
66
6
24
12
57
1.57
77645--77688
22
2.0
22
100
0
88
18
22
18
40
1.91
77876--77925
21
2.4
21
75
15
50
40
0
2
58
1.10
77967--78014
21
2.3
21
100
0
96
45
8
0
45
1.33
78029--78070
17
2.6
16
82
14
50
47
0
0
52
1.00
78029--78098
33
2.2
31
82
14
81
44
1
0
54
1.09
78094--78124
15
2.0
16
93
6
55
61
0
0
38
0.96

Tables:   1

The End!