Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001744.1 Kokia drynarioides strain JFW-HI SEQ_113455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57077

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1185--1214
5
6.0
5
100
0
60
80
0
20
0
0.72
3415--3452
18
2.1
19
85
5
51
34
0
2
63
1.09
19173--19215
19
2.3
19
83
0
59
60
4
0
34
1.17
26772--26810
19
2.1
19
90
0
60
46
0
0
53
1.00
28921--28973
24
2.2
25
83
6
65
62
7
5
24
1.44
30245--30275
9
3.3
9
95
4
53
19
0
3
77
0.90
30340--30435
42
2.3
42
100
0
192
53
13
14
18
1.73
32097--32121
11
2.3
11
100
0
50
8
44
0
48
1.32
37727--37766
19
2.1
19
85
0
53
55
2
10
32
1.47
41745--41846
47
2.1
47
94
1
177
40
23
9
26
1.86
43769--43913
62
2.3
64
86
3
204
29
17
13
38
1.89
47636--47684
12
3.8
12
75
19
53
51
0
8
40
1.32
47798--48097
84
3.5
86
94
2
493
43
5
4
46
1.48
47905--48050
45
3.4
45
64
22
114
40
6
5
47
1.51
48186--48250
22
3.0
22
83
0
85
41
32
9
16
1.80
49285--49341
30
1.9
29
86
10
80
22
5
5
66
1.32
50527--50618
30
3.1
30
87
3
123
26
7
3
63
1.37
50568--50624
17
3.6
18
71
28
65
24
12
3
59
1.48
50527--50630
30
3.4
30
84
4
120
26
7
2
62
1.37
51492--51611
63
1.9
61
88
3
177
39
15
19
25
1.91
51468--51775
164
1.9
163
86
4
442
37
14
17
30
1.90
51619--51892
123
2.2
119
83
6
334
34
16
18
29
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51619--51892
60
4.5
60
80
7
275
34
16
18
29
1.93
52728--52769
17
2.4
18
81
14
52
47
0
2
50
1.14

Tables:   1

The End!