Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001745.1 Kokia drynarioides strain JFW-HI SEQ_113456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58976

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
88
0
54
50
0
2
47
1.15
5262--5506
25
9.8
25
76
10
214
36
24
15
23
1.93
5309--5447
74
1.9
75
86
1
199
35
25
14
24
1.93
5424--5526
52
2.0
52
90
0
161
38
21
15
24
1.92
5384--5524
25
5.6
25
71
12
92
37
23
14
24
1.92
26116--26169
19
2.9
19
86
8
67
53
18
0
27
1.45
26128--26169
19
2.2
19
95
0
75
50
21
0
28
1.49
26184--26261
31
2.4
32
77
14
81
60
2
5
32
1.32
28816--28902
31
2.9
30
84
5
115
22
20
13
42
1.88
31111--31157
24
2.0
24
83
8
60
29
17
21
31
1.96
31248--31302
21
2.6
21
85
5
67
27
21
14
36
1.93
31248--31310
21
3.0
21
83
6
65
28
19
19
33
1.96
40480--40550
31
2.3
31
83
11
94
46
21
11
21
1.82
40870--40916
21
2.2
21
88
0
67
29
27
6
36
1.82
41132--41204
31
2.4
30
84
11
96
19
12
20
47
1.81

Tables:   1

The End!