Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001755.1 Kokia drynarioides strain JFW-HI SEQ_113470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90449

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
171--198
14
2.0
14
100
0
56
35
14
7
42
1.73
6617--6643
5
5.4
5
100
0
54
22
22
55
0
1.44
11155--11191
19
1.9
19
94
0
65
54
5
0
40
1.24
11173--11224
23
2.3
22
83
9
61
53
3
1
40
1.30
18287--18332
15
3.0
15
77
22
51
63
2
2
32
1.19
26861--27046
102
1.8
103
83
3
250
36
12
23
27
1.92
27654--27686
11
3.0
11
90
0
57
33
0
3
63
1.10
27922--28130
109
1.9
110
95
1
375
32
18
14
35
1.91
31184--31220
16
2.3
17
81
13
51
48
10
13
27
1.75
37277--37323
20
2.3
20
78
7
51
42
2
4
51
1.33
51493--51523
13
2.4
13
94
0
53
22
0
0
77
0.77
53088--53169
32
2.6
32
90
0
137
25
1
9
63
1.33
53098--53164
20
3.8
20
65
29
60
28
1
7
62
1.31
53512--53583
26
2.8
26
95
0
117
63
9
0
26
1.25
53484--53587
32
3.4
32
82
15
148
61
9
0
27
1.33
54273--54313
2
20.5
2
100
0
82
0
48
0
51
1.00
56798--56849
21
2.5
21
90
0
77
26
15
26
30
1.96
61062--61124
18
3.6
17
76
8
56
42
7
6
42
1.59
61076--61127
18
2.9
18
77
2
61
42
9
3
44
1.55
61175--61209
18
2.0
17
88
5
52
22
22
8
45
1.79
69738--69947
91
2.4
85
80
9
210
38
17
9
34
1.82
70137--70161
12
2.1
12
100
0
50
76
0
0
24
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71253--71299
11
4.2
11
81
10
51
65
2
2
29
1.15
71732--71774
19
2.3
19
84
8
52
37
2
13
46
1.57
72958--73018
31
2.0
31
83
0
77
59
3
4
32
1.35
80152--80233
33
2.5
33
83
11
107
26
14
10
47
1.77
80155--80233
31
2.5
33
85
8
101
25
15
11
48
1.78
80467--80613
31
4.9
30
67
19
92
44
11
18
25
1.83
80455--80625
59
2.9
58
84
3
198
46
11
16
24
1.81
80455--80544
28
3.1
28
70
9
81
48
10
18
22
1.77
80769--80807
19
2.0
20
85
5
53
53
5
10
30
1.56
83550--83604
27
2.0
28
85
3
76
27
5
3
63
1.33
89583--89870
30
9.8
29
80
9
257
33
3
28
34
1.74
89602--89942
29
11.6
29
77
9
282
33
3
27
35
1.74

Tables:   1

The End!