Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001764.1 Kokia drynarioides strain JFW-HI SEQ_113485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98239

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2401--2449
24
2.0
24
84
4
62
46
4
16
32
1.65
3737--3838
29
3.4
29
81
9
116
41
2
20
35
1.68
3726--3978
30
8.4
29
79
9
217
39
2
21
36
1.67
3787--3978
90
2.1
90
86
4
264
38
1
22
37
1.64
5249--5373
61
2.0
61
93
0
214
19
18
36
26
1.94
9827--9870
19
2.2
20
88
8
63
38
2
6
52
1.41
31869--31913
11
4.2
11
78
16
58
80
2
0
17
0.82
34290--34332
11
3.8
11
78
6
50
51
9
0
39
1.34
34266--34331
6
11.3
6
76
12
66
53
6
0
40
1.26
34264--34332
17
4.0
17
85
7
86
50
7
0
42
1.30
34305--34344
17
2.4
17
86
0
53
55
12
0
32
1.38
49632--49661
7
4.3
7
100
0
60
26
13
30
30
1.94
49896--49934
14
2.6
15
88
8
53
51
2
0
46
1.14
51394--51472
10
7.8
10
73
13
56
35
0
1
63
1.03
51398--51461
33
1.9
34
87
3
94
39
0
1
59
1.07
51432--51479
20
2.4
20
73
13
53
37
0
4
58
1.18
51777--51845
20
3.4
18
77
22
59
66
4
0
28
1.10
51777--51834
21
2.8
21
77
22
61
65
3
0
31
1.09
54092--54172
18
4.1
19
72
21
58
61
2
0
35
1.09
54092--54134
22
1.9
22
86
13
61
65
2
0
32
1.06
55750--56771
263
3.9
263
84
4
1212
21
11
22
44
1.84
66404--66444
20
2.0
20
100
0
82
36
14
19
29
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71231--71278
15
3.2
15
87
0
69
4
66
4
25
1.27
73359--73387
2
14.5
2
100
0
58
0
48
0
51
1.00
74306--74356
15
3.3
15
77
5
57
76
0
17
5
0.98
74320--74366
23
2.0
25
87
8
71
72
0
19
8
1.10
85408--85432
2
12.5
2
100
0
50
52
0
0
48
1.00
86281--86305
6
4.2
6
100
0
50
68
0
32
0
0.90
91469--91551
43
1.9
43
90
0
130
33
8
19
38
1.82
91739--91802
28
2.2
28
83
8
85
26
17
12
43
1.84

Tables:   1

The End!