Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000177.1 Kokia drynarioides strain JFW-HI SEQ_110851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82758

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
722--760
2
19.5
2
89
0
60
43
0
56
0
0.99
984--1010
2
13.5
2
100
0
54
51
0
48
0
1.00
1534--1570
18
2.0
19
89
5
58
48
13
5
32
1.65
1878--1922
23
1.9
24
81
4
56
44
28
4
22
1.72
2394--2423
6
5.0
6
95
0
51
16
36
16
30
1.91
3191--3279
44
2.0
45
95
2
162
30
12
4
52
1.58
10462--10607
67
2.2
63
90
6
229
47
0
3
49
1.18
15609--15652
6
6.8
6
82
12
52
79
0
20
0
0.73
15601--15652
20
2.5
20
84
9
70
78
0
21
0
0.74
16559--16750
50
3.8
50
84
0
231
35
18
22
22
1.95
16808--17459
80
8.2
80
90
3
1003
32
22
18
26
1.97
16808--17459
319
2.0
320
90
4
1050
32
22
18
26
1.97
16805--17577
39
19.4
39
73
10
523
31
23
18
26
1.97
18099--18271
63
2.8
60
86
8
235
42
0
4
53
1.24
23313--23357
18
2.6
17
82
6
54
33
8
4
53
1.52
28982--29028
24
2.0
23
84
12
60
65
4
2
27
1.22
32176--32323
77
1.9
77
98
0
287
37
25
12
23
1.91
48876--48923
22
2.2
22
88
7
71
37
6
8
47
1.59
49043--49075
14
2.4
14
90
10
50
81
0
0
18
0.68
52048--52157
39
2.8
40
79
5
109
42
15
6
35
1.72
52307--52393
38
2.3
38
82
4
95
55
4
4
35
1.41
53944--54017
22
3.5
21
75
15
80
29
2
1
66
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54120--54171
9
5.7
10
78
15
51
38
1
0
59
1.08
54120--54168
17
2.8
17
84
12
55
36
2
0
61
1.08
54120--54171
26
1.9
28
88
7
81
38
1
0
59
1.08
54371--54464
17
5.5
17
79
11
93
42
1
3
53
1.24
54371--54462
34
2.7
35
86
3
123
42
1
3
53
1.24
54371--54474
51
2.0
51
80
7
113
44
0
3
50
1.26
54829--55106
57
4.8
58
88
4
402
37
28
1
32
1.65
54823--55106
29
9.9
28
84
7
347
36
29
1
32
1.66
63845--63896
18
2.9
17
80
8
59
28
1
1
67
1.12
65336--65381
21
2.1
22
88
11
69
63
2
0
34
1.07
65337--65395
31
1.9
30
89
3
91
62
1
1
33
1.15
67166--67235
23
3.0
23
81
10
88
42
17
14
25
1.86
67147--67235
47
1.9
46
86
2
124
41
16
13
28
1.86
77275--77305
2
15.5
2
100
0
62
0
51
0
48
1.00
80586--80650
23
2.8
23
95
0
112
44
10
3
41
1.55

Tables:   1

The End!