Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001800.1 Kokia drynarioides strain JFW-HI SEQ_113535, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35393

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
441--509
6
12.0
6
81
17
76
49
0
2
47
1.16
451--516
11
5.9
11
83
15
82
54
0
1
43
1.09
454--516
17
3.7
17
82
16
85
52
0
1
46
1.10
441--509
23
3.0
23
85
12
97
49
0
2
47
1.16
4184--4231
21
2.3
22
78
10
55
39
0
0
60
0.97
4195--4231
19
2.0
18
89
5
56
40
0
0
59
0.97
17020--17089
24
3.0
23
75
10
70
42
20
10
27
1.83
22486--22566
40
2.0
40
100
0
162
34
17
7
40
1.77
23159--23225
33
2.0
33
85
5
91
37
7
22
32
1.82
23302--23326
12
2.1
12
100
0
50
24
16
24
36
1.94
23335--23381
21
2.1
22
84
7
60
21
19
25
34
1.96
25399--25442
19
2.3
19
100
0
88
59
9
22
9
1.56
28357--28410
27
2.0
28
92
3
92
38
3
9
48
1.53
28496--28542
17
2.6
19
83
16
64
48
0
0
51
1.00
28528--28586
28
2.1
29
81
9
68
45
3
0
50
1.18
29364--29428
16
4.4
16
69
26
54
61
0
3
35
1.12
29362--29417
25
2.2
25
93
0
103
64
0
3
32
1.11
29720--29765
22
2.1
22
100
0
92
34
17
15
32
1.91
32938--33003
28
2.4
28
82
7
82
50
4
0
45
1.22

Tables:   1

The End!