Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001807.1 Kokia drynarioides strain JFW-HI SEQ_113544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71931

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
209--242
12
2.7
13
95
4
61
44
2
0
52
1.16
867--922
11
4.9
11
79
14
60
51
0
1
46
1.11
867--925
22
2.6
22
86
7
84
50
0
1
47
1.11
903--947
18
2.6
18
82
3
56
48
0
2
48
1.13
1120--1169
22
2.3
22
82
6
57
34
2
6
58
1.34
1865--1915
26
1.9
27
84
4
68
54
5
5
33
1.48
6250--6358
58
1.9
57
83
9
141
25
14
10
49
1.75
8248--8300
24
2.2
24
83
3
63
20
0
5
73
1.03
8854--8880
7
3.9
7
100
0
54
25
0
0
74
0.83
9080--9136
18
3.1
18
79
18
64
38
1
1
57
1.19
15185--15221
17
2.1
18
85
14
51
48
21
2
27
1.63
15290--15389
48
2.0
51
81
9
118
44
19
4
33
1.69
19157--19198
22
2.0
21
86
13
59
71
0
7
21
1.09
27669--27738
31
2.3
31
89
0
104
35
10
11
42
1.74
28877--28911
16
2.2
16
90
5
54
28
0
0
71
0.86
30971--31067
48
2.0
48
78
7
99
37
4
1
57
1.25
31258--31303
19
2.4
19
82
7
58
65
0
4
30
1.12
32112--32541
61
7.1
59
78
9
323
31
17
15
35
1.91
32112--32658
120
4.5
121
78
9
408
30
17
14
37
1.90
32116--32668
62
9.1
62
76
9
333
30
17
15
37
1.90
32335--32668
125
2.8
119
82
7
376
30
17
13
38
1.88
33347--33382
7
5.1
7
93
0
63
55
0
30
13
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34964--35001
16
2.4
16
90
0
58
44
2
0
52
1.14
40965--41005
6
6.8
6
97
0
73
0
46
0
53
1.00
45992--46388
41
9.7
41
83
4
405
32
16
27
22
1.96
45992--46388
82
4.9
82
84
3
446
32
16
27
22
1.96
46822--46892
24
3.0
24
89
0
106
29
11
4
54
1.54
46838--46908
24
3.0
24
87
0
79
29
12
5
52
1.62
48802--48888
24
3.6
24
84
6
113
26
12
10
50
1.72
49634--49679
22
2.0
23
87
4
67
26
15
13
45
1.82
52273--52386
43
2.7
42
83
11
137
24
16
27
31
1.96
59145--59275
61
2.1
61
91
0
208
26
15
3
54
1.58
60855--60879
7
3.6
7
100
0
50
28
0
12
60
1.32
71760--71809
21
2.3
21
82
3
64
62
20
10
8
1.52

Tables:   1

The End!