Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01001816.1 Kokia drynarioides strain JFW-HI SEQ_113555, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 7805
ACGTcount: A:0.36, C:0.15, G:0.16, T:0.33


Found at i:3796 original size:13 final size:13

Alignment explanation


    Indices: 3778--3802  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

       3768 TTGATTAAAA

                         
       3778 AAAGTATTTTTAC
          1 AAAGTATTTTTAC

                        
       3791 AAAGTATTTTTA
          1 AAAGTATTTTTA

       3803 TTTATTTTAA


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.40, C:0.04, G:0.08, T:0.48


Consensus pattern (13 bp):   
AAAGTATTTTTAC
Done.