Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000186.1 Kokia drynarioides strain JFW-HI SEQ_110869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43657

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
369--427
29
2.0
30
86
3
84
30
6
13
49
1.68
1816--1845
14
2.1
14
93
0
51
36
0
0
63
0.95
6596--6641
21
2.1
21
84
4
56
39
6
2
52
1.40
9366--9398
6
5.5
6
89
10
50
15
0
0
84
0.61
9373--9398
11
2.4
11
100
0
52
15
0
0
84
0.62
10387--10692
39
7.8
39
81
2
328
35
19
18
26
1.94
23358--23414
21
2.7
21
77
0
60
47
21
7
24
1.75
23404--23449
21
2.2
21
84
0
56
43
13
8
34
1.74
24238--24444
18
11.5
18
77
0
81
37
19
8
33
1.83
24248--24438
36
5.3
36
75
3
136
39
18
8
33
1.81
24238--24438
54
3.7
54
76
10
137
38
19
8
33
1.82
25230--25415
93
2.0
93
96
0
345
41
4
23
30
1.73
27130--27357
114
2.0
112
83
5
289
37
17
15
28
1.91
30029--30075
18
2.6
19
84
15
57
55
2
2
40
1.24
32027--32185
58
2.7
57
82
6
158
34
5
26
33
1.80
32078--32335
29
8.8
30
76
14
195
35
3
25
35
1.73
32077--32303
59
3.9
59
81
6
257
36
3
25
34
1.72
32077--32330
59
4.3
58
81
6
237
36
3
25
35
1.72
32263--32357
30
3.2
30
81
11
81
37
4
18
38
1.71
33374--33425
13
4.1
13
82
5
61
34
1
1
61
1.18
33376--33425
3
16.0
3
79
8
55
34
2
2
62
1.18
33376--33427
22
2.4
21
84
9
68
34
1
1
61
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33383--33425
16
2.8
16
85
3
52
32
2
2
62
1.20
34009--34102
6
16.7
6
71
24
71
53
2
1
43
1.19
34009--34057
23
2.1
23
92
7
82
53
2
0
44
1.12
34023--34102
17
4.8
16
84
9
106
52
2
1
43
1.22
34023--34102
34
2.4
34
87
4
117
52
2
1
43
1.22
36389--37032
79
8.2
79
83
5
694
26
15
25
33
1.95
36389--37119
40
18.5
40
74
10
441
26
15
24
33
1.95
36389--37116
237
3.1
237
80
7
731
26
15
24
33
1.95
36428--37116
79
8.7
79
80
6
565
26
15
24
33
1.95
36389--37116
158
4.6
159
80
5
699
26
15
24
33
1.95
36509--37091
317
1.8
317
84
2
805
25
16
24
33
1.96
38504--38543
17
2.4
17
82
0
53
0
12
2
85
0.71

Tables:   1

The End!