Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001870.1 Kokia drynarioides strain JFW-HI SEQ_113635, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126866

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4398--4441
22
2.0
22
86
0
61
29
20
0
50
1.49
9470--9553
24
3.4
24
68
14
71
53
1
1
44
1.16
9678--9771
41
2.3
41
88
0
134
41
15
19
23
1.90
9733--9937
62
3.3
62
82
5
229
33
21
18
27
1.96
15409--15438
2
15.0
2
100
0
60
50
0
0
50
1.00
19809--19874
30
2.2
30
83
8
80
37
3
9
50
1.50
21801--21858
30
2.0
30
86
3
82
44
3
18
32
1.67
21811--22015
30
6.9
30
74
9
154
36
6
21
36
1.79
21844--22008
58
2.8
58
78
10
185
34
6
21
37
1.78
22697--22746
20
2.7
19
76
17
52
64
4
4
28
1.30
32063--32194
4
31.8
4
68
20
67
68
3
4
23
1.22
32063--32266
17
12.3
15
65
23
65
70
3
5
20
1.22
32063--32118
21
2.8
21
86
5
71
71
0
1
26
0.96
32063--32119
25
2.3
24
82
8
69
71
0
1
26
0.95
32127--32182
28
2.0
27
86
10
78
69
5
1
23
1.18
32067--32266
11
18.9
10
67
17
75
70
3
5
20
1.22
32170--32275
44
2.3
48
78
12
116
72
4
5
16
1.21
32416--32469
16
3.4
15
82
10
54
70
3
3
22
1.19
32416--32469
5
10.2
5
76
11
54
70
3
3
22
1.19
35059--35097
20
2.0
20
100
0
78
51
5
17
25
1.66
51876--51923
24
2.0
24
100
0
96
62
4
8
25
1.41
58361--58419
31
1.9
31
100
0
118
33
16
25
23
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59464--59507
24
1.9
22
82
17
54
34
15
22
27
1.95
65960--66012
27
2.0
27
100
0
106
32
7
15
45
1.74
68336--68388
3
18.0
3
92
3
90
35
0
0
64
0.94
69377--69411
15
2.3
15
90
0
52
8
28
8
54
1.60
71392--71579
92
2.0
92
100
0
376
35
22
19
23
1.96
93493--93519
7
3.9
7
100
0
54
40
0
0
59
0.98
94455--94562
42
2.6
42
100
0
216
36
18
3
41
1.68
105692--105737
24
1.9
24
81
0
56
21
4
4
69
1.24
106723--106771
16
3.0
16
72
16
55
48
0
2
48
1.12
106723--106775
17
3.2
17
69
15
56
49
0
1
49
1.12
112212--112490
52
5.4
52
84
2
312
34
21
15
29
1.94
117986--118263
52
5.4
51
82
5
299
34
22
14
28
1.94
117989--118263
103
2.7
104
85
3
340
34
22
14
28
1.94
124101--124145
18
2.5
18
88
0
63
44
20
15
20
1.87

Tables:   1

The End!