Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001881.1 Kokia drynarioides strain JFW-HI SEQ_113653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103022

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1385--1494
55
2.0
54
85
1
148
25
18
22
33
1.96
3970--4009
21
2.0
20
85
5
53
40
15
5
40
1.68
4238--4285
26
1.9
26
87
8
73
54
4
2
39
1.32
4280--4305
12
2.2
12
100
0
52
69
7
0
23
1.14
4278--4374
41
2.5
40
83
9
119
64
8
2
24
1.32
4804--4849
24
2.0
23
86
4
65
65
0
2
32
1.05
5077--5144
22
3.0
22
80
2
73
44
20
23
11
1.84
9605--9702
48
2.0
48
100
0
196
53
10
14
22
1.71
11707--11806
49
2.0
49
96
1
182
49
25
2
24
1.61
11955--12020
33
2.0
33
96
0
123
30
16
21
31
1.95
12441--12514
22
3.2
22
82
5
76
37
20
28
13
1.90
19913--19946
14
2.3
15
90
5
52
44
0
0
55
0.99
21776--21817
14
2.8
16
78
14
52
71
0
2
26
0.98
22374--22423
8
6.0
8
79
6
55
74
2
4
20
1.08
22374--22423
17
2.9
17
85
8
66
74
2
4
20
1.08
22374--22423
25
2.0
25
84
7
66
74
2
4
20
1.08
22617--22659
22
2.0
20
86
8
59
39
0
6
53
1.28
26681--26714
2
17.0
2
100
0
68
0
0
50
50
1.00
27369--27399
2
15.5
2
100
0
62
51
48
0
0
1.00
33696--33720
4
6.2
4
100
0
50
24
0
0
76
0.80
34970--35003
16
2.2
15
89
5
50
52
0
2
44
1.16
41620--41646
5
5.4
5
100
0
54
40
0
59
0
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46056--46111
18
3.1
18
76
7
51
57
3
0
39
1.16
68231--68336
23
4.6
23
78
3
106
44
18
22
14
1.86
68216--68322
46
2.3
46
84
7
130
46
19
22
11
1.81
71708--71756
25
1.9
26
83
4
64
24
6
2
67
1.24
76865--76893
2
14.5
2
100
0
58
51
0
0
48
1.00
77151--77182
2
16.0
2
100
0
64
50
0
0
50
1.00
78228--78272
5
9.0
5
97
0
54
40
48
0
11
1.39
78228--78272
15
3.0
15
90
0
63
40
48
0
11
1.39
81935--81961
14
1.9
14
100
0
54
74
0
0
25
0.83
82151--82211
23
2.7
23
74
2
61
54
1
1
42
1.20
83529--84179
328
2.0
327
98
0
1259
36
8
8
46
1.64
87756--87822
18
3.7
18
81
0
89
22
20
20
35
1.96
88743--88778
12
3.1
12
92
8
65
16
8
16
58
1.61
90999--91045
24
2.0
24
91
0
76
55
21
6
17
1.64
92504--92579
17
4.5
17
80
4
82
47
1
1
50
1.18
92502--92579
34
2.3
34
80
12
97
47
1
1
50
1.17
94287--94418
29
4.5
30
89
6
209
34
29
6
29
1.83
94290--94456
58
2.9
58
84
6
178
32
29
6
31
1.83
94811--95001
95
2.0
96
83
7
246
30
17
13
38
1.88
97233--97286
21
2.6
21
90
0
81
37
3
14
44
1.63
98503--98546
23
2.0
22
81
4
52
25
43
13
18
1.86

Tables:   1

The End!