Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001886.1 Kokia drynarioides strain JFW-HI SEQ_113659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100911

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1586--1610
2
12.5
2
100
0
50
52
0
0
48
1.00
2651--2687
11
3.5
11
92
7
58
27
0
2
70
1.01
7284--7308
6
4.2
6
100
0
50
68
0
0
32
0.90
8525--8563
20
2.0
20
89
0
60
38
17
23
20
1.93
8527--8589
18
3.4
18
78
12
65
33
23
23
19
1.97
9712--9846
40
3.4
38
73
12
96
30
28
20
21
1.98
9744--9847
37
2.7
38
76
5
93
31
26
19
22
1.97
14862--14906
19
2.4
19
85
7
56
55
6
0
37
1.26
14887--14933
24
2.0
24
86
0
67
44
0
2
53
1.12
14937--14981
21
2.2
20
84
4
54
64
2
0
33
1.06
15929--15953
6
4.2
6
100
0
50
68
0
0
32
0.90
17170--17208
20
2.0
20
89
0
60
38
17
23
20
1.93
17172--17234
18
3.4
18
78
12
65
33
23
23
19
1.97
18357--18491
40
3.4
38
73
12
96
30
28
20
21
1.98
18389--18492
37
2.7
38
76
5
93
31
26
19
22
1.97
23507--23551
19
2.4
19
85
7
56
55
6
0
37
1.26
23532--23578
24
2.0
24
86
0
67
44
0
2
53
1.12
23582--23626
21
2.2
20
84
4
54
64
2
0
33
1.06
23558--23778
109
2.0
109
98
0
424
49
3
6
40
1.45
26438--26476
19
2.1
19
100
0
78
43
30
15
10
1.80
28691--28775
43
2.0
43
81
4
100
21
21
30
27
1.98
34445--34529
42
2.0
42
90
0
134
21
27
10
41
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36871--36941
30
2.4
28
77
13
70
45
1
1
52
1.18
41602--41798
100
2.0
101
90
3
317
35
11
17
36
1.85
48128--48185
28
2.1
28
100
0
116
51
0
17
31
1.45
48128--48192
28
2.3
28
94
0
103
49
0
15
35
1.45
50215--50253
21
2.0
21
85
14
57
58
0
0
41
0.98
52363--52394
2
16.0
2
100
0
64
50
0
0
50
1.00
53891--53965
31
2.4
32
78
10
84
30
16
9
44
1.79
54137--54206
30
2.3
29
80
4
77
47
7
15
30
1.72
55810--55849
21
2.0
21
95
5
73
67
22
0
10
1.20
55808--55894
44
2.0
44
82
8
106
67
19
3
9
1.32
55870--55897
9
3.1
9
100
0
56
78
21
0
0
0.75
55911--55964
23
2.5
20
75
16
63
70
20
3
5
1.23
55917--55965
23
2.1
23
92
0
80
71
20
4
4
1.19
55911--56003
43
2.2
42
84
5
116
68
16
5
9
1.35
57026--57093
29
2.3
30
82
7
77
29
5
16
48
1.69
58102--58141
18
2.3
17
87
12
55
37
2
5
55
1.35
58134--58193
28
2.1
30
90
6
97
51
1
0
46
1.10
58134--58203
29
2.5
28
88
6
97
51
1
0
47
1.09
59218--59260
3
15.0
3
90
9
72
67
0
0
32
0.91
71175--71231
30
1.9
30
85
7
80
22
3
50
22
1.64
78092--78119
3
9.3
3
100
0
56
67
0
0
32
0.91
97753--97822
34
2.1
34
100
0
140
40
22
14
22
1.90

Tables:   1

The End!