Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001923.1 Kokia drynarioides strain JFW-HI SEQ_113722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37391

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2074--2107
17
2.0
17
100
0
68
29
0
0
70
0.87
2704--2749
18
2.5
19
82
6
51
47
2
0
50
1.13
2707--2749
19
2.2
20
88
12
63
48
2
0
48
1.14
2847--2876
14
2.1
15
93
6
53
40
0
6
53
1.27
2836--2876
14
2.6
16
77
22
50
39
0
4
56
1.21
2855--2901
20
2.2
21
88
7
69
25
0
4
70
1.05
8742--8786
21
2.1
22
87
4
65
35
17
4
42
1.70
9554--9628
38
1.9
38
84
10
98
32
20
24
24
1.98
9506--9683
85
2.1
86
84
5
227
33
17
19
29
1.95
11331--11409
41
1.9
41
82
7
97
44
1
3
50
1.28
13576--13619
23
2.0
22
82
13
54
31
13
4
50
1.62
13581--13674
20
4.5
21
75
15
72
28
12
4
54
1.57
15140--15232
48
1.9
48
89
4
143
17
17
11
53
1.72
21842--21880
17
2.3
17
90
0
60
15
12
25
46
1.81
21913--21950
18
2.2
18
95
4
69
50
5
10
34
1.59
23328--23372
20
2.3
20
84
3
56
55
0
0
44
0.99
23991--24103
55
2.1
55
83
6
140
33
7
15
42
1.77
24221--24279
9
6.4
9
70
18
50
49
0
0
50
1.00
24220--24279
17
3.8
17
65
26
51
50
0
0
50
1.00
24233--24300
21
3.5
20
66
20
54
52
0
0
47
1.00
24214--24292
37
2.1
37
90
0
122
53
0
0
46
1.00
34070--34111
19
2.2
19
83
8
50
21
9
2
66
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34502--34541
3
13.3
3
100
0
80
67
0
0
32
0.91
34673--34698
6
4.3
6
100
0
52
69
0
30
0
0.89
34742--34816
37
2.0
37
97
0
141
36
21
18
24
1.95
37353--37391
2
19.5
2
100
0
78
51
0
0
48
1.00

Tables:   1

The End!