Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001927.1 Kokia drynarioides strain JFW-HI SEQ_113728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69046

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1942--2020
29
2.7
30
84
7
99
51
0
0
48
1.00
1968--2008
11
3.9
11
81
6
50
53
0
0
46
1.00
1937--2030
31
3.1
32
77
8
90
46
2
0
51
1.13
2027--2079
17
3.2
17
70
20
58
16
32
0
50
1.46
2164--2361
99
2.0
99
92
0
333
22
31
8
37
1.85
4110--4187
18
4.3
18
79
4
77
21
37
1
39
1.62
4110--4180
30
2.4
30
80
4
81
22
36
1
39
1.63
11351--11419
6
12.0
6
74
11
56
53
2
1
42
1.24
11363--11419
17
3.3
18
80
9
57
57
3
0
38
1.16
11352--11408
11
5.2
11
81
6
62
52
1
1
43
1.21
11382--11415
16
2.1
17
88
5
52
58
5
0
35
1.22
11352--11420
23
3.0
25
80
16
78
55
2
1
40
1.24
12041--12092
24
2.2
24
82
6
61
48
7
3
40
1.50
12086--12127
15
2.8
15
88
0
57
57
9
7
26
1.56
13234--13395
28
5.6
28
72
17
134
36
28
4
30
1.77
13232--13395
29
5.6
29
75
16
142
35
28
4
31
1.77
13246--13415
30
5.7
29
70
15
114
34
29
4
31
1.78
13231--13429
59
3.4
59
87
0
254
36
28
4
31
1.77
13235--13494
118
2.2
117
80
5
274
33
28
6
31
1.83
16000--16025
12
2.2
12
100
0
52
7
15
0
76
0.99
27362--27436
30
2.5
30
82
8
82
57
6
0
36
1.25
31160--31209
27
1.9
27
84
8
68
60
14
10
16
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32395--32454
31
1.9
31
83
6
77
41
11
23
23
1.87
35722--35776
8
7.2
8
80
12
71
23
0
20
56
1.42
38152--38355
102
2.0
101
94
0
354
35
16
19
28
1.93
39328--39356
3
9.7
3
100
0
58
68
31
0
0
0.89
46028--46068
11
3.8
11
90
3
57
48
9
4
36
1.58
56666--56702
19
2.0
18
89
5
56
37
0
0
62
0.96
59780--59805
2
13.0
2
100
0
52
0
50
0
50
1.00
66019--66076
28
2.0
28
80
9
64
31
10
1
56
1.43
66573--66643
31
2.3
31
82
0
79
25
8
8
57
1.56

Tables:   1

The End!