Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001929.1 Kokia drynarioides strain JFW-HI SEQ_113731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58268

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20445--20642
50
3.9
50
87
2
261
34
12
14
38
1.83
20445--20642
101
2.0
102
84
5
267
34
12
14
38
1.83
20856--21087
79
2.9
78
86
3
297
36
18
19
25
1.94
30087--30154
31
2.2
30
84
2
82
48
17
2
30
1.62
30301--30348
25
1.9
25
83
8
62
62
12
8
16
1.53
34139--34173
6
5.8
6
93
0
52
45
0
54
0
0.99
34949--35027
4
20.5
4
75
12
58
67
0
31
1
0.99
34949--35006
25
2.3
25
88
11
84
67
0
32
0
0.91
35034--35058
12
2.1
12
100
0
50
36
0
0
64
0.94
35771--35865
30
3.2
30
71
14
97
35
5
12
46
1.65
37034--37125
43
2.2
42
84
5
114
31
10
9
47
1.71
37410--37441
15
2.1
16
88
11
50
25
28
28
18
1.98
37586--37637
6
8.7
6
95
0
50
46
11
42
0
1.40
37598--37638
6
6.8
6
97
0
64
48
4
46
0
1.23
37701--37792
45
2.0
45
89
0
139
36
28
13
21
1.91
38036--38081
21
2.2
21
84
0
56
45
28
2
23
1.65
41364--41436
36
2.1
36
87
7
105
46
2
4
46
1.36
41410--41468
31
1.9
31
82
3
75
30
3
8
57
1.45
43900--43958
15
3.8
15
72
16
57
50
0
1
47
1.11
44637--44762
65
1.9
65
95
0
225
35
25
3
34
1.75
52991--53060
35
2.0
35
100
0
140
40
17
8
34
1.80
53291--53315
12
2.1
12
100
0
50
48
16
0
36
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54773--54839
13
5.2
13
79
13
50
46
17
17
17
1.85
54801--54846
13
3.5
13
81
3
56
41
19
21
17
1.90

Tables:   1

The End!