Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01001962.1 Kokia drynarioides strain JFW-HI SEQ_113797, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 914

Length: 1524
ACGTcount: A:0.37, C:0.18, G:0.21, T:0.25


Found at i:140 original size:13 final size:13

Alignment explanation


    Indices: 122--149  Score: 56
    Period size: 13  Copynumber: 2.2  Consensus size: 13

        112 AAGTGCCCCT

                         
        122 ATCATATTAAAGC
          1 ATCATATTAAAGC

                         
        135 ATCATATTAAAGC
          1 ATCATATTAAAGC

              
        148 AT
          1 AT

        150 GTTGTCTTGA


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   15  1.00

ACGTcount: A:0.46, C:0.14, G:0.07, T:0.32


Consensus pattern (13 bp):   
ATCATATTAAAGC
Done.