Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001972.1 Kokia drynarioides strain JFW-HI SEQ_113816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88283

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5579--5812
52
4.5
52
82
4
258
34
22
14
28
1.93
12696--12939
52
4.7
52
82
3
294
36
24
11
27
1.90
21081--21131
24
2.1
24
88
0
75
54
5
1
37
1.36
23587--23626
20
2.0
20
100
0
80
50
5
5
40
1.46
33304--33358
12
3.7
15
73
26
53
3
5
54
36
1.41
33324--33352
12
2.4
12
100
0
58
0
0
58
41
0.98
34035--34059
13
1.9
13
100
0
50
56
12
16
16
1.68
34396--34449
27
2.0
28
85
3
74
57
9
0
33
1.31
35541--35582
10
4.3
10
80
14
52
61
4
0
33
1.17
35921--35959
20
1.9
20
84
5
51
33
0
7
58
1.26
36294--36326
2
16.5
2
100
0
66
48
0
0
51
1.00
37899--37938
21
2.0
21
85
5
55
22
5
12
60
1.52
37903--38015
56
2.0
56
86
1
156
23
10
15
50
1.75
48872--48901
16
1.9
16
93
6
53
16
13
0
70
1.18
48867--48927
22
2.8
22
87
7
72
14
11
1
72
1.20
48881--48927
21
2.2
22
92
3
78
14
8
2
74
1.15
65821--65863
18
2.4
18
88
7
61
46
0
0
53
1.00
67240--67355
40
2.8
39
80
7
124
37
22
18
20
1.94
67239--67548
41
7.5
41
79
6
236
37
19
24
19
1.94
68507--68559
21
2.5
22
82
11
65
37
7
13
41
1.72
74745--75060
50
6.4
47
71
16
203
38
20
24
16
1.92
74737--75060
99
3.3
99
93
0
531
38
20
24
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74737--75110
49
7.6
49
73
12
257
39
19
24
15
1.91
75746--75787
22
1.9
22
90
0
66
30
42
9
16
1.80
79652--79771
59
1.9
59
82
11
143
51
5
3
39
1.42

Tables:   1

The End!