Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NTFQ01001982.1 Kokia drynarioides strain JFW-HI SEQ_113833, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 124967

Tables:   1   

This is table  1  of  1  ( 36 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--152
17
2.2
18
86
9
53
2
23
0
74
0.94
121--155
17
2.1
16
94
5
61
0
20
0
80
0.72
121--158
12
3.1
12
85
14
51
0
18
0
81
0.69
119--169
21
2.5
20
79
20
61
1
21
0
76
0.88
1874--1920
25
2.0
25
87
8
71
36
2
6
55
1.37
5806--5864
20
2.9
19
75
9
55
66
3
3
27
1.24
5802--5865
32
2.0
31
85
11
85
64
3
3
29
1.24
5871--5925
5
9.8
5
83
14
56
18
5
1
74
1.10
5871--5925
11
4.9
10
79
20
56
18
5
1
74
1.10
7889--7935
25
2.0
25
87
8
71
36
4
6
53
1.46
15202--15267
33
2.0
33
88
5
98
36
7
18
37
1.79
19646--19707
28
2.1
28
85
5
79
40
1
8
50
1.42
22847--22895
20
2.3
21
86
6
64
65
2
0
32
1.04
23836--23868
17
2.1
16
88
11
50
54
3
0
42
1.15
24347--24460
59
1.9
59
85
0
156
51
12
12
23
1.73
29479--29709
112
2.1
112
96
0
426
36
19
8
35
1.82
30526--30560
6
5.8
6
89
0
52
0
20
2
77
0.90
30532--30571
21
1.9
21
89
0
62
2
20
2
75
1.04
35518--35660
43
3.3
43
94
0
241
24
26
23
25
2.00
38921--38960
2
20.0
2
100
0
80
50
0
0
50
1.00
39781--39842
29
2.1
30
82
8
74
40
8
6
45
1.59
41530--41561
2
16.0
2
93
0
55
0
46
0
53
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68935--68982
17
2.8
17
90
3
69
8
2
12
77
1.08
75293--75326
13
2.6
13
100
0
68
50
35
0
14
1.44
75407--75460
20
2.4
24
88
11
80
51
24
0
24
1.48
79735--79785
25
2.0
25
100
0
102
31
13
15
39
1.87
103980--104030
23
2.3
23
86
3
68
43
35
1
19
1.63
104097--104129
7
4.7
7
92
0
57
15
24
27
33
1.95
104087--104129
21
2.1
20
91
4
68
18
25
23
32
1.97
104977--105010
17
1.9
18
88
5
52
17
11
23
47
1.81
110844--110898
11
5.0
11
75
0
56
25
30
20
23
1.98
113314--113488
42
4.2
42
92
2
255
37
9
27
25
1.87
115613--115646
16
2.1
16
89
10
52
73
0
0
26
0.83
115593--115643
19
2.6
19
77
22
61
76
0
1
21
0.88
118568--118598
15
2.1
15
100
0
62
41
19
0
38
1.51
120434--120485
21
2.5
21
81
6
61
32
26
13
26
1.94

Tables:   1   

The End!