Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01001990.1 Kokia drynarioides strain JFW-HI SEQ_113845, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 959

Length: 1599
ACGTcount: A:0.37, C:0.16, G:0.15, T:0.32


Found at i:236 original size:5 final size:6

Alignment explanation


    Indices: 221--245  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

        211 GGGAAACCAC

                                         
        221 TTTTTG TTTTTG TTTTTG TTTTTG T
          1 TTTTTG TTTTTG TTTTTG TTTTTG T

        246 GGGCATTCTA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.00, C:0.00, G:0.16, T:0.84


Consensus pattern (6 bp):   
TTTTTG

Done.