Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002007.1 Kokia drynarioides strain JFW-HI SEQ_113869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41598

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
12035--12092
23
2.5
23
88
0
89
22
22
25
29
1.99
12954--12986
14
2.3
15
89
5
50
12
0
6
81
0.85
13840--13882
15
2.7
16
78
10
52
30
16
6
46
1.73
17038--17069
16
2.0
16
93
0
55
46
0
9
43
1.35
21356--21498
70
2.0
70
97
0
268
25
15
27
31
1.96
23748--23788
17
2.4
17
88
8
57
0
17
0
82
0.66
30349--30394
25
1.9
23
86
8
65
34
4
6
54
1.46
40034--40058
13
1.9
13
100
0
50
64
0
32
4
1.12
40033--40069
19
2.0
18
89
5
56
67
0
27
5
1.12
40130--40163
15
2.3
15
100
0
68
32
20
11
35
1.89

Tables:   1

The End!