Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002053.1 Kokia drynarioides strain JFW-HI SEQ_113945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58273

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
582--1003
41
10.4
41
77
4
345
18
28
19
32
1.96
582--1003
122
3.5
121
80
3
391
18
28
19
32
1.96
620--982
162
2.2
163
82
2
435
19
29
20
30
1.97
620--1003
81
4.7
80
79
2
394
18
29
20
31
1.96
7658--7709
26
2.0
26
85
7
70
34
3
7
53
1.48
9885--9995
27
4.1
27
88
0
168
22
18
25
34
1.96
9976--10020
20
2.2
20
88
0
63
24
15
26
33
1.95
11109--11152
22
2.0
22
86
8
63
52
4
4
38
1.42
11428--11566
69
2.0
69
98
0
269
28
29
14
28
1.95
12087--12135
21
2.3
23
79
10
59
44
2
2
51
1.24
12722--12771
23
2.0
26
85
11
70
54
8
0
38
1.30
25868--25918
24
2.1
24
88
0
75
31
7
3
56
1.46
26063--26087
8
3.1
8
100
0
50
0
12
40
48
1.40
29269--29299
3
10.3
3
100
0
62
0
32
0
67
0.91
36764--36807
20
2.2
20
84
8
54
61
2
4
31
1.28
37113--37178
13
5.1
13
81
3
80
36
22
7
33
1.83
39604--39641
6
6.5
6
90
3
51
60
13
15
10
1.59
39833--39860
5
5.6
5
100
0
56
0
0
82
17
0.68
40241--40284
22
2.0
23
86
4
63
36
2
2
59
1.23
44939--45031
38
2.4
40
85
7
120
37
20
16
25
1.93
52373--52416
20
2.2
20
84
15
56
45
0
4
50
1.22
52396--52429
17
1.9
18
88
5
52
41
0
2
55
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52388--52452
20
3.4
19
75
18
55
41
0
4
53
1.21
54167--54204
17
2.2
17
86
9
51
68
2
2
26
1.16
55727--55777
14
3.5
14
74
10
57
62
15
0
21
1.32
58237--58268
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!