Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002055.1 Kokia drynarioides strain JFW-HI SEQ_113952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89302

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--454
13
2.3
13
100
0
60
93
0
6
0
0.35
1590--1642
26
2.0
26
100
0
106
22
37
13
26
1.91
11208--11233
9
2.9
9
100
0
52
46
30
0
23
1.53
12062--12087
6
4.3
6
100
0
52
15
50
0
34
1.45
27799--27873
31
2.7
26
82
12
78
57
6
2
33
1.39
29326--29383
30
2.0
29
83
10
73
50
1
6
41
1.39
29352--29394
22
1.9
23
85
4
61
51
0
2
46
1.13
62228--62267
22
1.9
20
90
10
62
42
5
5
47
1.47
64769--64811
18
2.4
18
88
0
59
41
6
4
46
1.51
67114--67186
20
3.7
18
76
21
67
34
21
34
9
1.86
67114--67190
40
1.9
40
84
5
102
37
20
32
9
1.84
68891--68927
19
1.9
19
88
0
56
21
29
24
24
1.99
77043--77097
25
2.2
25
93
0
92
52
5
0
41
1.24
77512--77540
7
4.3
7
95
4
51
41
0
0
58
0.98
84225--84262
16
2.4
16
100
0
76
39
0
0
60
0.97
85546--85577
16
2.0
16
100
0
64
18
12
37
31
1.88

Tables:   1

The End!