Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002065.1 Kokia drynarioides strain JFW-HI SEQ_113974, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61023

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
432--467
18
2.1
18
89
5
56
33
25
0
41
1.55
900--924
9
2.8
9
100
0
50
0
12
8
80
0.92
8296--8353
25
2.4
23
79
20
82
44
0
0
55
0.99
8305--8362
25
2.2
26
93
6
100
44
0
0
55
0.99
8676--8728
7
7.6
7
100
0
106
28
43
15
13
1.84
9017--9073
22
2.6
22
80
2
71
40
0
3
56
1.17
9030--9081
24
2.2
23
83
10
61
42
0
3
53
1.19
23853--23893
21
2.0
21
85
0
55
39
21
17
21
1.93
24415--24580
78
2.1
78
82
6
203
27
22
16
33
1.96
24378--24584
52
4.0
52
83
1
227
27
21
17
33
1.96
24378--24584
26
8.0
26
77
4
184
27
21
17
33
1.96
25310--25369
3
20.0
3
96
0
111
66
1
31
0
1.01
26288--26321
17
1.9
18
94
5
61
32
5
20
41
1.76
47068--47097
14
2.2
14
94
5
53
30
16
10
43
1.81
50414--50456
12
3.5
12
90
3
68
60
0
39
0
0.97
50908--50955
17
2.8
17
83
0
60
20
16
12
50
1.78
50889--50967
17
4.6
17
75
1
59
20
24
10
45
1.81

Tables:   1

The End!