Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002108.1 Kokia drynarioides strain JFW-HI SEQ_114030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137590

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2322--2369
22
2.3
20
82
13
53
39
2
4
54
1.32
2596--2636
17
2.4
17
84
12
57
34
0
2
63
1.08
4147--4200
27
2.0
27
85
0
72
51
11
1
35
1.48
4800--4833
18
1.9
18
88
5
52
38
5
2
52
1.41
5781--5821
21
2.0
21
85
0
55
34
4
0
60
1.18
5850--5883
16
2.1
16
100
0
68
44
0
0
55
0.99
12654--12700
20
2.2
21
85
7
60
29
2
2
65
1.15
14037--14069
16
2.1
16
94
0
57
33
9
6
51
1.58
15388--15437
24
2.1
24
85
10
68
64
10
0
26
1.25
15952--16007
13
4.3
13
79
0
67
39
19
0
41
1.52
15941--15996
26
2.2
26
80
6
60
37
19
0
42
1.52
19034--19142
22
4.8
22
69
10
67
52
1
1
44
1.22
20203--20309
50
2.2
50
86
5
146
31
4
2
60
1.31
27561--27654
46
2.0
46
93
0
161
27
18
23
30
1.97
30324--30373
15
3.3
15
80
0
55
66
4
8
22
1.35
45132--45160
14
2.0
15
93
6
51
20
0
3
75
0.94
52595--52623
15
1.9
15
100
0
58
34
10
34
20
1.87
67359--67405
4
11.8
4
90
0
67
48
0
29
21
1.50
72145--72217
29
2.5
28
82
10
83
32
2
2
61
1.24
73710--73765
29
1.9
28
82
13
69
66
7
3
23
1.33
78220--78617
60
6.7
58
75
9
300
27
18
15
38
1.91
78433--78669
120
2.0
119
81
6
282
27
18
16
37
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81345--82093
84
8.8
84
95
1
1228
46
4
6
42
1.51
82254--82301
12
3.7
12
75
20
51
39
8
0
52
1.32
82263--82297
17
2.1
16
89
5
52
48
8
0
42
1.33
85262--85311
26
2.0
25
84
4
64
34
2
0
64
1.05
85718--85783
33
2.0
33
88
5
98
40
19
9
30
1.83
86093--86441
60
5.8
59
78
8
262
39
14
17
28
1.89
86094--86440
119
2.9
119
75
11
264
40
14
17
28
1.88
86545--86575
15
2.0
16
93
6
55
64
6
0
29
1.18
96543--96581
18
2.2
18
90
0
60
74
15
7
2
1.15
96548--96592
24
2.0
24
86
8
67
77
15
6
0
0.96
104765--104813
19
2.6
19
81
9
57
69
2
0
28
1.00
110415--110588
94
1.8
95
90
3
280
37
14
13
33
1.86
118077--118109
15
2.3
15
89
5
50
51
0
0
48
1.00
117664--118514
415
2.0
422
83
7
1053
40
8
9
40
1.70
119908--119944
2
18.5
2
100
0
74
0
51
0
48
1.00
126574--126725
30
5.1
30
94
0
250
12
20
25
42
1.87
127071--127115
22
2.0
22
82
0
54
51
8
13
26
1.70
129397--129447
23
2.2
23
78
0
57
62
1
0
35
1.06
129777--129861
31
2.6
32
80
9
84
42
1
2
54
1.21
135609--135642
17
2.0
17
88
11
52
52
26
0
20
1.46

Tables:   1

The End!