Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002153.1 Kokia drynarioides strain JFW-HI SEQ_114102, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47927

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6110--6168
24
2.5
24
82
0
73
47
10
13
28
1.75
17041--17095
19
2.9
18
81
7
65
25
1
1
70
1.06
17042--17090
25
2.0
25
83
0
62
22
2
2
73
1.04
17048--17124
14
5.4
14
69
22
52
18
2
1
77
0.95
17087--17134
25
1.9
25
82
0
60
10
4
4
81
0.97
18335--18382
25
1.9
25
91
8
80
72
2
4
20
1.11
22451--22486
18
2.1
17
89
5
54
80
2
8
8
0.99
26354--26544
29
6.6
28
69
21
108
34
5
25
35
1.79
26325--26556
59
3.9
59
84
6
292
34
6
26
33
1.81
26325--26762
117
3.7
116
78
10
360
36
4
24
34
1.75
26384--26754
29
12.6
30
70
13
166
38
4
23
34
1.74
26384--26762
59
6.5
58
80
6
306
37
3
24
34
1.74
27760--27833
3
24.7
3
74
15
64
35
2
0
62
1.10
28262--28286
12
2.1
12
100
0
50
24
24
32
20
1.98
28502--28572
11
6.7
11
68
20
53
56
2
2
38
1.29
28494--28585
17
5.4
17
84
2
121
54
4
2
39
1.32
28493--28578
6
14.8
6
69
11
54
53
4
2
39
1.34
28494--28597
34
3.0
35
82
2
138
53
3
3
38
1.37
29423--29968
49
11.2
50
67
12
224
19
25
17
37
1.94
29422--29963
98
5.5
98
86
0
647
19
25
17
37
1.94
30396--30430
18
1.9
18
94
0
61
57
11
11
20
1.64
41825--42044
29
7.5
30
71
17
133
38
6
22
33
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41825--42094
58
4.6
59
80
6
250
38
6
22
31
1.79
41825--42097
29
9.3
29
67
16
127
39
6
22
31
1.79
42048--42142
49
2.0
49
87
10
142
41
4
25
29
1.74
42099--42247
29
5.1
28
70
16
106
38
3
22
36
1.71
42096--42251
59
2.7
59
79
11
178
38
3
23
34
1.71
42001--42201
108
1.9
108
82
8
257
40
3
22
32
1.71
43319--43415
3
31.7
3
81
10
108
34
2
1
62
1.13
44743--44952
43
4.9
43
76
5
147
31
23
15
29
1.95
45510--45535
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!