Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002194.1 Kokia drynarioides strain JFW-HI SEQ_114173, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106508

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2077--2119
7
6.3
7
97
2
79
44
0
16
39
1.48
4123--4330
57
3.6
57
81
2
229
49
6
17
26
1.70
4286--4315
13
2.4
13
94
5
53
76
0
6
16
0.99
14729--14780
27
2.0
27
85
11
72
11
11
1
75
1.14
14780--14816
18
2.1
18
90
10
58
2
35
0
62
1.10
15680--15712
16
2.1
16
100
0
66
42
0
21
36
1.53
18973--19030
24
2.4
23
85
5
71
39
1
15
43
1.57
30826--30886
26
2.4
25
83
10
70
29
1
1
67
1.10
30846--30902
26
2.3
26
84
6
73
31
1
1
64
1.13
33110--33274
70
2.4
70
89
5
246
40
31
5
23
1.77
33697--33826
58
2.2
59
88
4
190
26
16
11
46
1.81
33975--34139
31
5.5
31
71
14
123
44
10
17
26
1.82
33991--34193
89
2.3
87
86
4
273
49
10
14
25
1.75
50557--50610
28
2.0
27
85
10
74
33
3
12
50
1.59
51177--51210
17
2.0
17
94
0
59
20
0
0
79
0.73
55444--55485
18
2.3
19
79
4
50
23
7
7
61
1.47
62098--62144
24
2.0
24
83
8
60
53
2
25
19
1.56
70330--70510
92
2.0
92
95
0
326
34
25
14
25
1.94
75475--75818
181
1.9
186
85
9
492
31
16
13
38
1.88
77479--77556
37
2.2
36
84
8
99
19
14
19
47
1.82
84108--84240
70
1.9
67
86
4
185
32
9
11
46
1.72
86380--86488
35
3.2
34
65
21
84
40
12
6
40
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86378--86517
67
2.1
67
93
1
237
40
12
7
40
1.70
104069--104098
15
2.0
15
100
0
60
33
6
13
46
1.69

Tables:   1

The End!