Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002203.1 Kokia drynarioides strain JFW-HI SEQ_114187, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23403

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4455--4503
14
3.8
14
74
17
52
40
0
6
53
1.26
5105--5297
78
2.5
78
91
1
307
32
17
27
22
1.96
5492--5894
81
5.0
81
92
1
628
20
22
17
38
1.93
7550--7593
19
2.4
19
80
3
54
50
6
13
29
1.68
8168--8327
30
5.4
28
83
8
151
38
3
24
34
1.71
8142--8328
90
2.1
90
83
6
229
37
2
25
34
1.70
8142--8328
60
3.1
58
77
11
182
37
2
25
34
1.70
10946--10992
22
2.2
21
88
3
67
19
2
2
76
0.99
16766--16817
20
2.6
19
80
14
61
30
1
17
50
1.57
16777--16816
21
1.9
21
90
10
64
27
2
20
50
1.61
16810--17360
142
3.9
144
88
4
798
38
4
5
51
1.45
17188--17239
18
2.7
19
83
13
63
32
1
3
61
1.25
17225--17482
122
2.1
121
88
5
378
36
5
5
53
1.46
17333--17936
145
4.2
144
88
4
891
35
4
5
54
1.43
19044--19084
15
2.7
15
96
0
73
7
9
48
34
1.64
20574--20634
18
3.2
18
73
15
59
72
0
0
27
0.85
20555--20636
27
3.2
27
81
11
93
68
0
1
30
0.98
20581--20627
22
2.0
23
88
8
69
72
0
0
27
0.85
20574--20634
21
3.0
22
69
18
67
72
0
0
27
0.85
20793--20823
11
2.8
11
90
0
53
48
0
32
19
1.49
22062--22096
16
2.2
16
90
10
54
65
0
17
17
1.27

Tables:   1

The End!