Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002214.1 Kokia drynarioides strain JFW-HI SEQ_114205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66089

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
760--794
7
5.3
7
93
6
56
40
0
60
0
0.97
5023--5072
24
2.1
24
84
0
64
50
16
12
22
1.77
7955--8003
23
2.1
21
82
14
53
53
2
4
40
1.32
8799--8829
16
1.9
16
93
0
53
54
3
6
35
1.42
11001--11109
36
3.0
36
97
0
200
25
11
12
49
1.75
17115--17285
93
1.8
94
82
1
218
35
15
19
29
1.93
18728--18773
24
1.9
24
86
0
65
39
17
15
28
1.90
24025--24065
14
2.7
16
77
14
50
43
0
0
56
0.99
25251--25325
4
18.0
4
80
13
80
69
1
28
1
1.05
25253--25285
17
1.9
17
100
0
66
72
3
24
0
0.98
25251--25325
21
3.6
20
80
12
80
69
1
28
1
1.05
25835--25876
22
2.0
21
85
4
57
61
0
4
33
1.17
27210--27294
43
2.0
43
86
4
118
30
11
10
47
1.74
27750--27797
6
8.0
6
88
0
51
41
22
33
2
1.66
27750--27803
18
3.0
18
86
5
65
42
20
35
1
1.63
27752--27803
12
4.3
12
85
4
52
44
17
36
1
1.60
27776--27816
6
6.8
6
97
0
55
48
7
43
0
1.30
27764--27816
18
2.9
18
85
0
61
45
13
41
0
1.43
27776--27815
12
3.3
12
92
0
62
50
7
42
0
1.30
28180--28209
14
2.1
15
93
6
53
46
33
0
20
1.51
30621--30668
24
2.0
24
100
0
96
16
16
20
45
1.85
31473--31544
35
2.1
35
84
5
92
48
2
4
44
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33139--33197
31
1.9
31
89
0
91
52
8
5
33
1.54
36468--36535
27
2.4
28
87
9
102
45
0
1
52
1.09
37615--37693
21
3.9
21
68
20
69
50
1
0
48
1.08
37603--37693
30
3.1
30
79
6
87
51
2
1
45
1.20
37615--37691
38
2.0
39
89
2
120
49
1
0
49
1.09
42142--42172
6
5.2
6
100
0
62
48
32
19
0
1.49
45776--45810
19
1.9
18
88
11
54
62
5
22
8
1.45
52878--52930
22
2.4
21
79
17
63
71
5
16
5
1.25
53457--53517
30
2.1
30
93
3
106
31
3
13
52
1.56
54074--54106
17
1.9
17
88
11
50
48
0
3
48
1.17
54166--54190
10
2.5
10
100
0
50
80
0
0
20
0.72

Tables:   1

The End!