Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002220.1 Kokia drynarioides strain JFW-HI SEQ_114214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86567

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1213--1519
80
3.8
80
86
3
395
33
26
17
21
1.96
2920--2958
20
2.0
20
94
0
69
25
12
20
41
1.88
3220--3297
35
2.2
35
86
8
106
21
11
23
43
1.85
4060--4112
24
2.2
23
78
15
54
52
3
5
37
1.43
6368--6500
28
4.7
28
87
2
169
45
26
14
13
1.81
16132--16174
20
2.2
20
83
8
52
34
18
2
44
1.63
18260--18546
52
5.5
54
77
5
241
34
20
16
28
1.94
18260--18532
105
2.6
105
81
2
325
34
19
16
28
1.94
18260--18530
53
5.2
54
76
6
164
34
19
16
29
1.94
27114--27456
52
6.5
53
80
5
358
34
21
16
27
1.95
27114--27456
105
3.3
105
85
4
419
34
21
16
27
1.95
27114--27454
157
2.2
157
83
3
409
34
21
17
27
1.95
28715--28751
18
2.2
18
85
9
51
0
13
2
83
0.74
31840--31898
26
2.3
25
80
11
66
42
27
0
30
1.56
31939--31973
15
2.2
16
90
5
54
48
34
8
8
1.64
32711--32735
6
4.2
6
100
0
50
36
0
32
32
1.58
33116--33160
22
1.9
24
86
13
67
26
0
6
66
1.16
33939--33995
23
2.5
23
78
13
73
29
21
29
19
1.97
50342--50614
136
2.0
136
95
1
494
32
13
18
34
1.90
58649--58699
24
2.1
24
85
0
66
25
9
9
54
1.63
60630--60680
24
2.1
24
88
0
75
23
9
11
54
1.66
65653--65725
35
2.1
36
89
7
114
43
4
2
49
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66601--66668
35
1.9
35
93
0
118
25
14
16
44
1.85
66895--66929
14
2.4
15
90
4
54
31
0
17
51
1.45
69610--69663
21
2.6
21
85
5
65
29
14
27
27
1.95
78609--78646
2
19.0
2
88
0
58
44
0
5
50
1.24
82629--82653
5
5.0
5
100
0
50
80
0
0
20
0.72

Tables:   1

The End!