Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002254.1 Kokia drynarioides strain JFW-HI SEQ_114267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  184989

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
606--667
22
2.8
23
75
4
65
16
4
11
67
1.37
6572--6611
9
4.4
9
87
0
53
47
5
7
40
1.54
6679--6723
18
2.6
16
80
16
54
60
2
0
37
1.09
8639--8670
11
2.8
11
95
4
55
43
0
0
56
0.99
8642--8692
17
3.0
18
80
11
63
43
0
5
50
1.26
16999--17368
186
2.0
186
87
1
535
35
23
11
29
1.89
30372--30397
4
6.5
4
100
0
52
50
0
0
50
1.00
51638--51700
31
2.0
31
87
0
90
41
15
9
33
1.80
54714--54944
115
2.0
115
98
0
444
34
16
8
40
1.80
57614--57713
50
2.0
50
100
0
200
30
8
20
42
1.80
59921--59970
22
2.3
22
79
6
57
22
8
8
62
1.49
60759--60793
16
2.1
17
94
5
63
48
0
0
51
1.00
61613--61665
21
2.5
22
81
3
72
56
13
18
11
1.66
65766--65810
19
2.3
19
85
11
56
51
6
4
37
1.49
67161--67194
2
17.0
2
93
0
59
47
0
0
52
1.00
70390--70806
166
2.5
166
88
3
622
40
18
15
24
1.90
79644--79720
29
2.6
29
82
12
86
25
14
14
45
1.82
81102--81179
29
2.7
28
80
13
79
39
10
5
44
1.60
99164--99856
192
3.7
190
82
7
779
31
17
19
31
1.95
99699--100019
166
2.0
164
85
5
445
31
17
19
30
1.95
100871--100981
55
2.0
55
98
0
213
32
5
18
43
1.73
102154--102198
20
2.2
21
80
11
58
46
0
2
51
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104428--104539
55
2.0
55
89
0
170
44
10
13
31
1.78
108383--108418
18
2.0
18
88
0
54
38
0
0
61
0.96
109316--109384
31
2.2
31
84
0
84
46
11
10
31
1.74
109964--110045
30
2.8
30
83
9
98
46
3
2
47
1.33
114480--114545
31
2.1
33
82
5
82
39
7
12
40
1.71
116537--116587
13
3.5
14
80
15
59
39
0
1
58
1.09
116537--116582
15
3.0
15
82
14
58
34
0
2
63
1.07
116529--116639
29
3.7
29
73
11
100
47
0
0
50
1.13
128049--128251
31
6.6
31
73
9
148
46
5
9
38
1.61
131769--131827
28
2.1
28
81
12
68
35
1
10
52
1.45
132652--132775
61
2.0
61
95
0
221
39
10
9
40
1.72
134095--134195
43
2.3
43
96
0
184
30
22
24
21
1.99
146831--146877
19
2.5
19
86
3
60
68
8
10
12
1.40
149274--149306
5
6.6
5
92
0
57
75
3
0
21
0.93
150858--150895
18
2.1
19
85
5
51
34
2
0
63
1.09
155317--155376
31
1.9
32
86
3
86
31
3
20
45
1.67
156575--156621
23
2.0
24
83
4
60
48
19
0
31
1.49
158000--158030
2
15.5
2
100
0
62
51
0
0
48
1.00
163171--163486
160
2.0
157
89
1
488
19
18
20
41
1.91
163329--164014
222
3.1
221
88
2
990
21
18
20
39
1.93
165379--165414
18
2.0
19
89
10
58
36
0
5
58
1.22
170951--171032
31
2.7
30
81
5
92
54
2
8
34
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
171284--171345
23
2.6
24
77
10
65
40
3
4
51
1.39
184183--184625
233
1.9
233
90
0
717
22
16
21
38
1.93
184398--184832
210
2.1
210
92
0
717
22
17
21
39
1.93

Tables:   1

The End!