Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002264.1 Kokia drynarioides strain JFW-HI SEQ_114283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33887

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3885--3950
23
2.9
23
93
2
107
53
24
0
22
1.47
5781--5833
15
3.5
15
73
14
54
56
7
9
26
1.57
5774--5834
31
2.0
31
96
0
113
54
9
9
26
1.64
8110--8174
32
2.0
32
82
5
78
49
7
3
40
1.47
8156--8197
21
1.9
22
90
9
68
57
0
2
40
1.12
12151--12263
25
4.5
25
78
4
111
25
14
25
34
1.94
12151--12271
51
2.4
50
79
5
127
27
13
24
34
1.93
16794--16877
24
3.5
24
86
1
123
28
22
23
25
1.99
22537--22566
12
2.5
12
94
0
51
40
10
13
36
1.78
23185--23314
6
22.2
6
70
10
90
39
0
3
56
1.17
23185--23299
23
5.2
23
73
12
105
39
0
2
58
1.12
23185--23314
17
7.4
17
77
7
109
39
0
3
56
1.17
23242--23328
17
5.8
15
73
23
60
39
1
5
54
1.32
25474--25532
28
2.1
28
96
0
109
50
15
6
27
1.68
26309--26494
30
6.2
28
81
9
156
37
3
20
38
1.71
26309--26504
60
3.3
56
80
11
194
37
4
20
37
1.72
26309--26507
90
2.2
89
84
7
251
37
4
21
37
1.73
26332--26503
30
5.8
30
81
8
183
37
2
21
38
1.69
28279--28338
17
3.6
16
84
8
66
55
6
0
38
1.27
28632--29638
209
4.8
208
87
1
1444
22
22
18
36
1.95
32633--32722
46
2.0
46
97
0
171
16
32
13
37
1.88
32761--32834
17
4.4
17
87
3
96
44
0
2
52
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32766--32816
6
8.8
6
77
16
54
41
0
3
54
1.19
32755--32834
34
2.4
34
85
4
108
45
0
3
51
1.19
32866--32919
15
3.6
15
87
0
81
40
27
14
16
1.88
33433--33474
18
2.3
19
91
4
68
45
4
2
47
1.36
33546--33589
7
6.1
7
80
15
54
56
2
0
40
1.11

Tables:   1

The End!