Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002304.1 Kokia drynarioides strain JFW-HI SEQ_114342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115981

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1845--1870
2
13.0
2
100
0
52
50
0
0
50
1.00
11649--11699
20
2.6
19
72
22
52
58
9
13
17
1.61
11622--11699
38
2.0
39
87
2
113
57
11
15
15
1.65
11626--11692
20
3.4
20
66
17
50
59
10
14
14
1.60
22933--22970
17
2.2
17
86
9
51
23
0
2
73
0.95
33998--34023
2
13.0
2
100
0
52
50
0
0
50
1.00
35260--35446
95
2.0
95
97
0
356
42
23
11
22
1.85
44225--44285
28
2.2
28
88
2
88
31
11
26
31
1.91
44250--44622
58
6.6
57
74
13
218
36
4
26
31
1.78
44308--44446
28
4.9
28
69
14
86
35
5
28
31
1.79
44491--44597
29
3.6
28
71
8
88
42
1
22
33
1.65
44358--44553
107
1.8
107
82
4
252
37
3
28
30
1.74
44465--44555
29
3.2
27
73
11
74
39
1
27
31
1.64
44451--44643
59
3.3
58
78
10
180
39
4
24
31
1.74
44451--44643
58
3.3
59
78
9
166
39
4
24
31
1.74
44529--44696
30
5.7
30
69
13
100
35
4
25
34
1.77
45727--45773
3
16.0
3
91
4
78
29
0
2
68
1.02
46486--46523
6
6.3
6
84
9
51
50
5
0
44
1.24
46486--46519
17
2.0
17
100
0
68
47
5
0
47
1.26
49406--49448
18
2.4
18
80
7
52
51
0
2
46
1.13
56673--56726
10
5.4
10
80
8
56
62
0
3
33
1.12
56981--57038
20
2.8
21
82
10
66
41
3
0
55
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57121--57192
21
3.5
19
75
11
63
26
5
1
66
1.21
65600--65626
14
1.9
14
100
0
54
25
22
22
29
1.99
68173--68239
32
2.1
32
97
0
125
41
5
13
38
1.69
83499--83602
51
2.0
51
86
0
145
34
9
33
22
1.86
88153--88235
23
3.5
23
80
4
85
69
19
2
8
1.25
88132--88221
35
2.7
32
81
6
99
68
20
2
8
1.27
88171--88225
12
4.7
12
86
4
85
76
14
0
9
1.02
88153--88225
24
3.1
24
86
4
85
71
17
2
8
1.23
88252--88325
22
3.3
22
75
14
78
71
12
6
9
1.30
88252--88327
25
3.2
25
83
9
97
72
11
6
9
1.28
88284--88338
25
2.2
25
83
6
67
72
14
5
7
1.24
93678--93712
2
17.5
2
87
0
52
57
0
0
42
0.99
93761--93788
6
4.7
6
100
0
56
17
17
0
64
1.30
94060--94120
30
2.1
30
84
3
79
37
8
1
52
1.41
102710--102738
10
2.7
11
89
10
51
79
0
0
20
0.74

Tables:   1

The End!