Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002319.1 Kokia drynarioides strain JFW-HI SEQ_114364, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24569

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4525--4707
30
6.2
29
78
8
109
37
22
7
32
1.82
4536--4752
60
3.6
59
81
7
222
35
23
8
32
1.85
4547--4797
30
8.4
30
74
8
181
36
23
8
31
1.85
4552--4797
60
4.1
58
81
5
206
36
23
8
31
1.85
11632--11829
99
2.0
99
82
0
243
34
13
28
23
1.92
11679--12707
50
20.8
49
69
9
478
34
14
30
20
1.93
11829--12260
99
4.4
99
83
2
483
35
14
29
19
1.92
11729--12605
351
2.5
345
84
4
1040
35
14
29
20
1.93
12282--12726
99
4.5
99
81
2
500
34
16
29
19
1.93
11632--12706
450
2.4
439
84
3
1325
34
14
29
20
1.93
12561--12701
49
2.9
49
75
10
135
34
13
31
20
1.91
12996--13155
85
1.9
85
84
2
214
38
14
22
25
1.92
12895--13902
209
4.8
209
84
2
1186
38
16
21
23
1.93
13197--13354
85
1.9
85
86
0
226
36
12
24
27
1.90
12972--13902
417
2.2
418
86
2
1278
37
16
21
23
1.93
13614--13780
85
2.0
85
87
2
246
38
14
23
23
1.91
13699--13791
48
1.9
48
89
4
143
40
13
22
22
1.89
15541--15678
30
4.7
28
76
12
125
34
23
9
32
1.87
15541--15624
29
2.8
29
83
8
98
33
26
8
32
1.86
15537--15678
60
2.4
59
82
3
178
35
23
9
32
1.86
18961--18999
12
3.2
12
79
13
53
0
35
2
61
1.10

Tables:   1

The End!